Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= NC_031126.1 Length=244840 Score E Sequences producing significant alignments: (Bits) Value seq24 91.5 2e-13 seq14742 86.0 1e-11 >seq24 Length=14409 Score = 91.5 bits (100), Expect = 2e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 3217 GTAGCTCAGTTGGTCAGAGCGCTCGCCTGATAAGCGGGAGGTCAGTGGTTCAAGTCCACT 3276 ||||||||| |||| ||||| | ||||||||||||| |||||||||||||| |||||||| Sbjct 4774 GTAGCTCAGGTGGTTAGAGCACACGCCTGATAAGCGTGAGGTCAGTGGTTCGAGTCCACT 4833 Query 3277 CGAGACAACCAATTC 3291 | | | |||||||| Sbjct 4834 CATGCCCACCAATTC 4848 >seq14742 Length=52551 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 3218 TAGCTCAGTTGGTCAGAGCGCTCGCCTGATAAGCGGGAGGTCAGTGGTTCAAGTCCA 3274 ||||||||||||| ||||||||||| ||||||||| ||||||| ||||||||||||| Sbjct 2343 TAGCTCAGTTGGTTAGAGCGCTCGCTTGATAAGCGAGAGGTCACTGGTTCAAGTCCA 2287 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 783201124800000