Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= NC_031127.1 Length=240761 Score E Sequences producing significant alignments: (Bits) Value seq2471 123 4e-23 >seq2471 Length=3256 Score = 123 bits (136), Expect = 4e-23 Identities = 179/250 (72%), Gaps = 2/250 (1%) Strand=Plus/Minus Query 196069 CTGACCGTACCGGCACGGGCACCATCTCTATTTTCGGGTATCAGATGCGTTTTGACCTGC 196128 ||||||| |||||||||||||| || | ||||| | |||| || || || | Sbjct 2921 CTGACCGGACCGGCACGGGCACGCGATCGCTGTTCGGCCGCACGCTGCGCTTCGATCTCC 2862 Query 196129 GCAAAGGGTTCCCGCTGGTCACCACCAAAAAGTTGCACCTGCGATCTATCATCCACG-AA 196187 || | || ||||||||| |||| || || | | | ||| | | ||| || Sbjct 2861 GCGACGGCTTCCCGCTGCTCACGACGAAGCGGATCTTCTGGCGCGGCG-CGGCGACGGAA 2803 Query 196188 CTGTTGTGGTTCCTGAACGGCGACACCAACATCCAGTATCTGAAAGACAACAACGTCAGT 196247 ||| | |||||||||| |||| |||||||||| ||||| || || ||| ||||| Sbjct 2802 CTGATCTGGTTCCTGAGCGGCTCGACCAACATCCGCTATCTCAACGAGAACGGCGTCACG 2743 Query 196248 ATCTGGGATGAGTGGGCAGATGAAGATGGCGATCTTGGCCCCGTCTACGGTAAGCAGTGG 196307 |||||||| |||||||| || || | ||||| || ||||| |||||||| ||||||||| Sbjct 2742 ATCTGGGACGAGTGGGCCGACGAGGCCGGCGAACTCGGCCCGGTCTACGGCAAGCAGTGG 2683 Query 196308 CGTGCATGGG 196317 || || |||| Sbjct 2682 CGCGCCTGGG 2673 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 770150972071000