Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq14182 116 9e-21 seq334 107 4e-18 >seq14182 Length=2243 Score = 116 bits (128), Expect = 9e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 151896 ACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCT 151955 || ||||| || || ||||| || ||||||||||| || || | ||| | |||||||| Sbjct 583 ACCAGATGCAGTGTGGACTCCTTCTGGATGTTGTAGTCTGCCAGAGTGCGGCCATCTTCC 642 Query 151956 AGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGA 152015 || || ||||||||||| || | ||||||||| | | || || ||||| || ||| Sbjct 643 AGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGA 702 Query 152016 ATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTG 152075 || || |||||| |||| | | |||| ||||| || || || || || || ||| Sbjct 703 ATCTTGCTCTTGACATTCTCAATGGTGTCGCTGCTCTCCACCTCCAGTGTGATGGTCTTG 762 Query 152076 CCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || ||||| || |||| ||||| Sbjct 763 CCAGTCAGTGTCTTGACAAAGATTTGCAT 791 >seq334 Length=28022 Score = 107 bits (118), Expect = 4e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 151896 ACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCT 151955 || |||||||| || ||||| || ||||||||||| || || | || | ||||| || Sbjct 27851 ACCAGATGAAGTGTGGACTCCTTCTGGATGTTGTAGTCTGCCAGGGTGCGGCCATCCTCC 27792 Query 151956 AGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGA 152015 || || || || ||||| || | ||||||||| | | ||| || ||||| || ||| Sbjct 27791 AGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGA 27732 Query 152016 ATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTG 152075 || || |||||| |||| | | | || ||||| || || ||||| || || ||| Sbjct 27731 ATCTTGCTCTTGACATTCTCAATGGTATCGCTGCTCTCCACCTCCAGAGTGATGGTCTTG 27672 Query 152076 CCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || ||||| || |||| ||||| Sbjct 27671 CCAGTCAGTGTCTTGACAAAGATTTGCAT 27643 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153580940486975