Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= NC_031944.1 Length=185102 Score E Sequences producing significant alignments: (Bits) Value seq14742 453 1e-122 >seq14742 Length=52551 Score = 453 bits (502), Expect = 1e-122 Identities = 722/1025 (70%), Gaps = 18/1025 (2%) Strand=Plus/Plus Query 170592 TGGTTCGATGTCCTGGATGACTGGCTTAAACGT---GATCGGTTTGTATTTGTGGGCTGG 170648 ||||| |||| | ||||||||| | |||| || || ||||||||||| || ||| Sbjct 37759 TGGTTTGATGACGCAGATGACTGGTT---ACGTCAAGACCGTTTTGTATTTGTAGGTTGG 37815 Query 170649 TCTGGACTTCTTCTTTTTCCCACTGCTTATCTTGCAATTGGCGGCTGGCTTACGGGCACG 170708 || || ||||||||||| || ||||||| ||||| |||| || ||| |||| || || Sbjct 37816 TCAGGTCTTCTTCTTTTCCCTTGTGCTTATTTTGCACTTGGAGGTTGGTTTACTGGTACA 37875 Query 170709 ACATTTGTTACAAGTTGGTACACCCACGGACTTGCAAGTTCGTACCTTGAAGGTGCTAAT 170768 || ||||| ||| |||||||| || || | || ||| || | |||||| ||| Sbjct 37876 ACTTTTGTAACATCATGGTACACACATGGTTTAGCTTCTTCATATTTAGAAGGTTGTAAC 37935 Query 170769 TTCCTTACAGCGGCTGTGTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTT 170828 ||| | ||||| ||||| ||||| ||||| | ||||| ||| ||| || || | ||| Sbjct 37936 TTCTTAACAGCAGCTGTTTCAACTCCTGCAAACAGTATGGCTCACTCT-TTATTATTCTT 37994 Query 170829 -TGGGGTCCTGAGTCTCAGGGGGATTTCCAACGCTGGTTACAACTTGGGGGACTCTGGAA 170887 ||||| ||||| | || || || || || |||| ||| | || || || |||| Sbjct 37995 ATGGGGACCTGAAGCACAAGGTGACTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGAC 38054 Query 170888 TTTTGTGGCGCTCCACGGAGCCTTTGCTCTCATAGGTTTCATGCTTCGGCAGTTTGAAAT 170947 ||| | || | || ||| | || | | | || || || ||| | || || |||||||| Sbjct 38055 ATTTATTGCTTTACATGGATCTTTCGGTTTAATTGGATTTATGTTACGTCAATTTGAAAT 38114 Query 170948 CAGTCGTCTCGTAGGGA--TTA-GACCGTACAATGCAATCGCTTTCTCTGGTCCTATCGC 171004 |||| || || | ||| | || |||||||| || |||||||| | ||||| | Sbjct 38115 TGCTCGT-TC--AGTTAATTTACGTCCATACAATGCTATTGCTTTCTCGGCGCCTATTTC 38171 Query 171005 TGTGTTTGTCAGCGTGTTCCTCATCTATCCTCTTGGGCAGTCAAGTTGGTTCTTCGCACC 171064 || ||||| || ||| | || || || | || || || | ||||| || || || Sbjct 38172 AGTTTTTGTTTCAGTTTTCTTAATTTACCCATTAGGACAATCTGGCTGGTTTTTTGCTCC 38231 Query 171065 TTCCTTTGGAGTTGCAGCAATCTTCCGCTTCCTGCTCTTCCTGCAAGGTTTCCACAACTG 171124 | ||||| || ||||| || ||||| ||| | | || | ||||| ||||| ||||| Sbjct 38232 TAGTTTTGGTGTAGCAGCTATTTTCCGTTTCATTTTATTTTTCCAAGGCTTCCATAACTG 38291 Query 171125 GACACTGAATCCATTTCATATGATGGGTGTTGCAGGTATCCTCGGCGGTGCATTGCTTTC 171184 ||| | || ||||| || ||||||||||| |||||| | | || | ||| | | | Sbjct 38292 GACTTTAAACCCATTCCACATGATGGGTGTAGCAGGTGTTTTAGGAGCTGCTCTATTATG 38351 Query 171185 TGCAATTCATGGTGTTACAGTAGAGAATACTTTGTATGAAGATGGTGATCAAGCAAACAC 171244 ||| ||||| |||| ||| || || || || || | |||||||||||| || ||||| Sbjct 38352 TGCTATTCACGGTGCTACTGTTGAAAACACATTATTTGAAGATGGTGACGGTGCTAACAC 38411 Query 171245 CTTTAAGGCATTTGACACGACTCAGGAGGAAGAGACATATTCTATGGTCACTGCTAATCG 171304 || |||||| || | || || | ||||| || || || ||||| || || || || Sbjct 38412 ATTCCGTGCATTTAACCCAACACAAGCTGAAGAAACTTACTCAATGGTAACAGCGAACCG 38471 Query 171305 TTTCTGGTCGCAGATTTTTGGTATCGCGTTCAGCAATAAGCGTTGGTTGCATTTCTTTAT 171364 ||||||||| || |||||||| | || ||| ||||| |||||| | || ||||| || Sbjct 38472 TTTCTGGTCTCAAATTTTTGGGGTTGCTTTCTCAAATAAACGTTGGCTTCACTTCTTCAT 38531 Query 171365 GCTGTTTGTTCCTGTCATGGGTCTTTGG--GTCAGTAGTCTGGGGATTATTGGTCTTGCT 171422 ||| |||||||||| | ||||||||| ||||| | | || | |||| | ||| Sbjct 38532 GCTTCTTGTTCCTGTTGTAGGTCTTTGGATGTCAG--CTATTGGTGTAGTTGGGTTAGCT 38589 Query 171423 CTTAATCTTAGGGCTTATGATTTCGTAAGTCAGGAGGTCAGAGCAGCAGAAGATCCAGAG 171482 | ||| | | |||||||| ||||| || || | | ||||| || ||||| || Sbjct 38590 TTAAATTTACGTGCTTATGACTTCGTTTCACAAGAAATTCGTGCAGCTGAGGATCCGGAA 38649 Query 171483 TTCGAGACGTTCTATACCAAGAACATCCTATTGAATGAAGGTCTTCGTGCATGGATGGCA 171542 ||||| || ||||| || || || || | || ||||||||| | ||||| |||||||| Sbjct 38650 TTCGAAACTTTCTACACAAAAAATATTATTTTAAATGAAGGTATCCGTGCTTGGATGGCT 38709 Query 171543 CCAGTAGACCAACCACATGAAAACTTTGTGTTCCCAGAGGAAGTTCTACCTCGTGGCAAT 171602 | |||||||||||||||| |||| ||||| || ||||| |||||||||| ||| Sbjct 38710 GCGCAAGACCAACCACATGAACGTCTTGTATTCCCTGAAGAAGTATTACCTCGTGGTAAT 38769 Query 171603 GCACT 171607 || || Sbjct 38770 GCTCT 38774 Score = 280 bits (310), Expect = 2e-70 Identities = 271/348 (78%), Gaps = 0/348 (0%) Strand=Plus/Minus Query 169856 GTCTTCCAAGCTGAGCACAACATCCTCATGCACCCCTTCCACATGCTTGGTGTTGCGGGA 169915 || |||||||||||||||||||| || |||||||| ||||||||| | |||||||| || Sbjct 9281 GTTTTCCAAGCTGAGCACAACATTCTTATGCACCCATTCCACATGTTAGGTGTTGCTGGT 9222 Query 169916 GTGTTTGGTGGGTCTCTGTTTAGCGCGATGCACGGTAGCCTCGTCACTTCGAGTCTTGTC 169975 || |||||||| || | || || ||||||||| | || ||||| | | || Sbjct 9221 GTATTTGGTGGTTCATTATTCTCTGCAATGCACGGTTCATTAGTAACTTCATCTTTAATC 9162 Query 169976 CGTGAAACCACCGAGAACGAGTCCCAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAG 170035 |||||||| || || ||||| || ||| | || ||||| ||||||||||||||||| Sbjct 9161 CGTGAAACTACTGAAAACGAATCTGCTAACGAAGGATACAAATTCGGTCAAGAAGAAGAA 9102 Query 170036 ACCTACAACATCGTTGCCGCTCACGGTTACTTCGGTCGCCTGATCTTCCAATACGCTTCC 170095 || |||||||| || || || || |||||||| || || | ||||||||||||||||| Sbjct 9101 ACATACAACATTGTAGCTGCACATGGTTACTTTGGACGTTTAATCTTCCAATACGCTTCT 9042 Query 170096 TTCAACAACTCCCGTTCACTGCACTTCTTCCTCGCAGCATGGCCTGTTGTTGGCATCTGG 170155 ||||||||||| |||||| | ||||||||| | || || ||||| || ||||| || ||| Sbjct 9041 TTCAACAACTCTCGTTCATTACACTTCTTCTTAGCTGCTTGGCCAGTAGTTGGTATTTGG 8982 Query 170156 TTCACCGCTCTTGGTGTCTCCACGATGGCGTTCAACCTGAACGGTTTC 170203 ||||| ||| | ||| | || || ||||| |||||| | ||||| ||| Sbjct 8981 TTCACTGCTTTAGGTATTTCAACTATGGCATTCAACTTAAACGGATTC 8934 Score = 233 bits (258), Expect = 2e-56 Identities = 264/351 (75%), Gaps = 2/351 (1%) Strand=Plus/Minus Query 169373 ACTGACAACCGTCTGTATGTCGGTTGGTTCGGCGTCCTGATGATCCCCTGCCTGCTGGCA 169432 ||||| |||||| | || ||||||||||||| || | |||||||| | | || Sbjct 12250 ACTGAAAACCGTTTATACATCGGTTGGTTCGGTGTTATCATGATCCCTACATTATTAACA 12191 Query 169433 GCAACCACTTGTTTCATCATCGCCTTCATCGGTGCTCCCCCTGTGGACATCGACGGCATC 169492 || || || ||||||||||| ||||||| ||| || || || || ||||| || || Sbjct 12190 GCTACTTCTGTATTCATCATCGCTTTCATCGCTGCACCTCCAGTTGATATCGATGGTATT 12131 Query 169493 CGCGAACCCGTTGCTGGTTCTCTGATGTATGGTAACAACATCATCTCTGGTGCTGTTGTG 169552 || || || ||| ||||||| | | || || |||||||||||||||||||||||||| Sbjct 12130 CGTGAGCCAGTTTCTGGTTCATTATTATACGGAAACAACATCATCTCTGGTGCTGTTGTT 12071 Query 169553 CCCTCTTCCAACGCAATCGGTCTTCACTTCTATCCCATCTGGGAAGCAGCAAGTCTCGAT 169612 || | || ||||| || ||| | || ||||| || || |||||||| || | | ||| Sbjct 12070 CCTACATCAAACGCTATTGGTTTACATTTCTACCCAATTTGGGAAGCTTCATCTTTAGAT 12011 Query 169613 GAATGGTTGTACAACGGTGGTCCTTTCCAACTGGTTGTCTTCCACTTCCTCATCGGCATC 169672 || ||||| |||||||||||||||| |||| | | || | ||||||| || | || || Sbjct 12010 GAGTGGTTATACAACGGTGGTCCTTACCAATTAATCGTTTGCCACTTCTTCTTAGGTATT 11951 Query 169673 TA-TGCTTACATGGGTCGTGAGTGGGAATTGTCCTATCGTCTGGGTATGCG 169722 | |||| ||||||||||||| |||||||| || || ||| | |||||||| Sbjct 11950 TGCTGCT-ACATGGGTCGTGAATGGGAATTATCTTACCGTTTAGGTATGCG 11901 Score = 107 bits (118), Expect = 2e-18 Identities = 109/142 (77%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 170202 TCAACTTCAACCAGTCCATCATCGATGGTCAGGGTCGTGTGCTCAACACCTGGGCAGACG 170261 ||||||||||||| || | | || ||| |||||||| | ||||| ||||||||| Sbjct 8285 TCAACTTCAACCAATCAGTAGTTGACTCTCAAGGTCGTGTATTAAACACTTGGGCAGACA 8226 Query 170262 TTCTCAACCGTGCTGGTCTTGGCATGGAAGTGATGCACGAGCGTAATGCTCACAACTTCC 170321 | ||||||||||| | || |||||||| ||||||||||||||||| |||||||||| Sbjct 8225 TCATCAACCGTGCTAACTTAGGTATGGAAGTTATGCACGAGCGTAATGCGCACAACTTCC 8166 Query 170322 CTCTCGACCTCGCTGCTGCTGA 170343 | | ||| | || ||| ||| Sbjct 8165 CATTAGACTTAGCGTCTGTTGA 8144 Score = 104 bits (114), Expect = 3e-17 Identities = 104/135 (77%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 169718 ATGCGCCCTTGGATCTGTGTTGCTTACTCTGCTCCCGTTGCGGCAGCCTCCGCTGTTTTC 169777 ||||| |||||||| ||| |||||||||||||| ||||| || || | || || ||| Sbjct 10477 ATGCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCAGTTGCAGCTGCTACTGCAGTATTC 10418 Query 169778 CTGGTCTACCCGTTTGGGCAAGGGTCGTTCTCTGACGCTATGCCTCTGGGTATCTCGGGA 169837 | |||| || | || ||||| || |||||||| | ||||||| | |||||||| ||| Sbjct 10417 ATCATCTATCCTATCGGACAAGGTTCTTTCTCTGATGGTATGCCTTTAGGTATCTCTGGA 10358 Query 169838 ACCTTTAACTACATG 169852 || || |||| |||| Sbjct 10357 ACTTTCAACTTCATG 10343 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592078294762000