Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq14182 159 7e-34 seq334 156 9e-33 seq11472 129 1e-24 seq6527 122 2e-22 seq7244 96.9 7e-15 seq5821 87.8 4e-12 seq14437 86.0 1e-11 seq13516 86.0 1e-11 seq1525 86.0 1e-11 >seq14182 Length=2243 Score = 159 bits (176), Expect = 7e-34 Identities = 176/229 (77%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||||||||| || | ||||||||| | ||| || || |||||||||||||| || Sbjct 565 CCACCACGCAGACGCAATACCAGATGCAGTGTGGACTCCTTCTGGATGTTGTAGTCTGCC 624 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||||||||||| || || || || ||||| ||||||| ||| || |||||| ||| Sbjct 625 AGAGTGCGGCCATCTTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGAGGA 684 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCT-TCGA 283050 |||||||||||||| || ||| ||||| || || | || || |||| || ||| || | Sbjct 685 ATACCCTCCTTGTCCTGAATC-TTGCTCTTGACATTCTCAATGGTGT-CGCTGCTCTCCA 742 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 | || || ||||| ||||| || |||| ||||| || || || ||||| Sbjct 743 CCTCCAGTGTGATGGTCTTGCCAGTCAGTGTCTTGACAAAGATTTGCAT 791 Score = 102 bits (112), Expect = 2e-16 Identities = 91/114 (80%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||||||||| || |||||||| | || || || |||||||||||||| || Sbjct 1845 CCACCACGCAGGCGCAGCACCAGATGGAGTGTAGACTCCTTCTGGATGTTGTAGTCTGCT 1904 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCA 282986 || ||||||||||| || || || || || |||||||||| ||| || |||||| Sbjct 1905 AGTGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCA 1958 Score = 98.7 bits (108), Expect = 2e-15 Identities = 90/114 (79%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||||||||| || |||||||| | || || || || ||||||||||| || Sbjct 793 CCACCACGCAGGCGCAGCACCAGATGGAGTGTAGACTCCTTCTGAATGTTGTAGTCTGCT 852 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCA 282986 || ||||||||||| ||||| || || ||||| || |||| ||| || |||||| Sbjct 853 AGGGTGCGGCCATCTTCTAGCTGCTTGCCGGCGAAAATCAGACGCTGCTGGTCA 906 Score = 89.7 bits (98), Expect = 1e-12 Identities = 88/114 (77%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||||||||| | ||||| || | || || || |||||||||||||| || Sbjct 1313 CCACCACGCAGGCGCAACACCAGGTGGAGTGTAGACTCCTTCTGGATGTTGTAGTCTGCT 1372 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCA 282986 || ||||||||||| || || || || || || ||||||| ||| || |||||| Sbjct 1373 AGTGTGCGGCCATCTTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCA 1426 >seq334 Length=28022 Score = 156 bits (172), Expect = 9e-33 Identities = 175/229 (76%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| |||||||| | |||||||| | ||| || || |||||||||||||| || Sbjct 27869 CCACCGCGCAGGCGCAACACCAGATGAAGTGTGGACTCCTTCTGGATGTTGTAGTCTGCC 27810 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || |||||||||||||| || || || || |||||||||| ||| || |||||| || Sbjct 27809 AGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCAGGGGGG 27750 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCT-TCGA 283050 |||||||||||||| || ||| ||||| || || | || || || | || ||| || | Sbjct 27749 ATACCCTCCTTGTCCTGAATC-TTGCTCTTGACATTCTCAATGGTAT-CGCTGCTCTCCA 27692 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 | || |||||||| ||||| || |||| ||||| || || || ||||| Sbjct 27691 CCTCCAGAGTGATGGTCTTGCCAGTCAGTGTCTTGACAAAGATTTGCAT 27643 Score = 104 bits (114), Expect = 5e-17 Identities = 92/115 (80%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||||||||| || |||||||| | || || || |||||||||||||| || Sbjct 27642 ACCACCACGCAGGCGCAGCACCAGATGGAGTGTAGACTCCTTCTGGATGTTGTAGTCTGC 27583 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCA 282986 || ||||||||||| || || || || || || ||||||| |||||| |||||| Sbjct 27582 TAGAGTGCGGCCATCTTCCAGCTGCTTGCCAGCGAAGATCAGACGTTGCTGGTCA 27528 >seq11472 Length=8128 Score = 129 bits (142), Expect = 1e-24 Identities = 131/168 (78%), Gaps = 2/168 (1%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || |||||||| || || |||||||| | ||| || || |||||||||||||| ||| Sbjct 5158 CCTCCACGCAGACGCAGCACCAGATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCTGCA 5099 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || |||||||||||||| || || || || || ||||||| ||| || |||||| ||| Sbjct 5098 AGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCAGGAGGA 5039 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTC 283039 || || ||||| || |||||| ||||| ||||| | || || ||||| Sbjct 5038 ATCCCTTCCTTATCCTGGATC-TTGCTCTTTACATTCTCAATGGTGTC 4992 Score = 113 bits (124), Expect = 9e-20 Identities = 100/125 (80%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || |||||||| || ||||||||||| | || || || |||||||||||||| ||| Sbjct 6522 CCTCCACGCAGACGCAGTACCAGATGCAGGGTAGACTCCTTCTGGATGTTGTAGTCTGCA 6463 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || |||||||||||||| || || || || |||||||||| ||| || |||||| ||| Sbjct 6462 AGAGTGCGGCCATCCTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCAGGAGGA 6403 Query 282993 ATACC 282997 ||||| Sbjct 6402 ATACC 6398 Score = 109 bits (120), Expect = 1e-18 Identities = 99/125 (79%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || |||||||| || || |||||||| | ||| || || |||||||||||||| ||| Sbjct 6059 CCTCCACGCAGACGCAGCACCAGATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCTGCA 6000 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||||| |||||||| || || || || |||||||||| ||| || |||||| ||| Sbjct 5999 AGGGTGCGACCATCCTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCAGGAGGA 5940 Query 282993 ATACC 282997 ||||| Sbjct 5939 ATACC 5935 Score = 104 bits (114), Expect = 5e-17 Identities = 98/125 (78%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || |||||||| || || |||||||| | ||| || || |||||||| ||||| ||| Sbjct 5598 CCTCCACGCAGACGCAGCACCAGATGCAGGGTGGACTCCTTCTGGATGTTATAGTCTGCA 5539 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||||| |||||||| || || || || |||||||||||||| || |||||| || Sbjct 5538 AGAGTGCGACCATCCTCCAGCTGCTTGCCAGCAAAGATCAAACGCTGCTGGTCAGGAGGG 5479 Query 282993 ATACC 282997 ||||| Sbjct 5478 ATACC 5474 Score = 104 bits (114), Expect = 5e-17 Identities = 99/127 (78%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 282871 AACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG 282930 |||| |||||||| || || |||||||| | || || || |||||||||||||| | Sbjct 7541 AACCTCCACGCAGACGCAGCACCAGATGCAGGGTAGACTCCTTCTGGATGTTGTAGTCTG 7482 Query 282931 CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCG 282990 |||| ||||||||||| || || || || || |||||||||| ||| || |||||| | Sbjct 7481 CAAGTGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCAGGGG 7422 Query 282991 GAATACC 282997 | ||||| Sbjct 7421 GGATACC 7415 Score = 102 bits (112), Expect = 2e-16 Identities = 98/126 (78%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| |||||||| || | |||||||| | || || || |||||||||||||| || Sbjct 6953 ACCTCCACGCAGACGCAACACCAGATGCAGGGTAGACTCCTTCTGGATGTTGTAGTCTGC 6894 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| ||||| |||||||| || || || || |||||||||| ||| || |||||| || Sbjct 6893 AAGAGTGCGACCATCCTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCAGGAGG 6834 Query 282992 AATACC 282997 |||||| Sbjct 6833 AATACC 6828 >seq6527 Length=17209 Score = 122 bits (134), Expect = 2e-22 Identities = 129/170 (76%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 316168 TCTTCACCGGAAGCATAACGCCATTGGATGTACTGATTGGGCGTCATGTCAAGATGATCC 316227 ||||| || |||||||||||| |||||||||| ||| || ||| |||| || || | | Sbjct 14604 TCTTCTCCCACAGCATAACGCCACTGGATGTACTCATTAGGTGTCTTGTCCAGGTGCTGC 14545 Query 316228 TCGATGTGGTGGAAAGCGTGCTGTGCCACGTAAGCAAGACGCATATTTGGATGCTTCCAA 316287 || |||||||||||||| ||||| |||||||| |||| ||| | || || |||||||| Sbjct 14544 TCAATGTGGTGGAAAGCATGCTGAGCCACGTACGCAATACGTAGGTTGGGGTGCTTCCAG 14485 Query 316288 ACGCTACCGTTAGTAGTTTCCATCTGCCCTGTTAGCACTTTAATGAGAGT 316337 || |||| | ||| | || ||| || || ||||| || || || || Sbjct 14484 ACTGTACCCTCAGTGGCCTCAGTCTCTCCAGTGAGCACCTTGATCAGGGT 14435 >seq7244 Length=2690 Score = 96.9 bits (106), Expect = 7e-15 Identities = 100/130 (77%), Gaps = 1/130 (1%) Strand=Plus/Plus Query 282885 CGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCA 282944 || ||||| ||||| || || || || |||||||| ||||| ||||| ||||||||| Sbjct 610 CGCAGTACAAGATGCAAGGTAGACTCCTTCTGGATGTTATAGTCTGCAAGGGTGCGGCCA 669 Query 282945 TCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTG 283004 || || || || || |||||||| ||||| ||||| || || || || ||||||||| Sbjct 670 TCTTCCAGCTGCTTGCCGGCAAATATCAAGCGTTGCTGATCCGGTGGGATGCCCTCCTTG 729 Query 283005 TCTTG-GATC 283013 || || |||| Sbjct 730 TCCTGCGATC 739 >seq5821 Length=8729 Score = 87.8 bits (96), Expect = 4e-12 Identities = 89/116 (77%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 301432 GACCCCTATATCAACGTCGATCCGGGGACGATGAGCCCGACTCAACATGGAGAAGTGTTC 301491 || |||||| ||||||||||||| || |||||| ||||| || || || || || ||| Sbjct 283 GATCCCTATCTCAACGTCGATCCCGGAACGATGTCGCCGACGCAGCACGGCGAGGTCTTC 342 Query 301492 GTGACGGATGATGGTGCTGAAACCGATCTGGATCTGGGGCACTACGAACGTTTCAC 301547 || || || || || || || ||||| || || || || |||||||| || ||||| Sbjct 343 GTCACCGACGACGGCGCCGAGACCGACCTCGACCTCGGCCACTACGAGCGCTTCAC 398 >seq14437 Length=4579 Score = 86.0 bits (94), Expect = 1e-11 Identities = 52/55 (95%), Gaps = 0/55 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCC 168808 |||||||||||| ||||||||||||||||||||||||| || ||||||||||||| Sbjct 2142 TAGTATAGTGGTCAGTATCCCTGCCTGTCACGCAGGAGGCCCGGGTTCAATTCCC 2196 >seq13516 Length=6390 Score = 86.0 bits (94), Expect = 1e-11 Identities = 52/55 (95%), Gaps = 0/55 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCC 168808 |||||||||||| ||||||||||||||||||||||||| || ||||||||||||| Sbjct 788 TAGTATAGTGGTCAGTATCCCTGCCTGTCACGCAGGAGGCCCGGGTTCAATTCCC 842 >seq1525 Length=16864 Score = 86.0 bits (94), Expect = 1e-11 Identities = 52/55 (95%), Gaps = 0/55 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCC 168808 |||||||||||| ||||||||||||||||||||||||| || ||||||||||||| Sbjct 847 TAGTATAGTGGTCAGTATCCCTGCCTGTCACGCAGGAGGCCCGGGTTCAATTCCC 901 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046521600911150