Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq14182 143 2e-29 seq334 132 4e-26 seq11472 118 1e-21 seq7244 98.7 9e-16 >seq14182 Length=2243 Score = 143 bits (158), Expect = 2e-29 Identities = 169/229 (74%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| || ||||||||||| ||| ||||||||| ||||| ||||| | Sbjct 564 GCCACCACGCAGACGCAATACCAGATGCAGTGTGGACTCCTTCTGGATGTTGTAGTCTGC 623 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 || ||||| | || || ||||||||||||||||| ||||| ||||| ||||| | || Sbjct 624 CAGAGTGCGGCCATCTTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGAGG 683 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCAC 41814 || | |||||||||| || || ||| | | | |||||||| |||||| Sbjct 684 AATACCCTCCTTGTCCTGAATCTTGCTCTTGACATTCTCAATGGTGTCGCTGCTCTCCAC 743 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||||| || || || || || ||||| ||||| || || || |||||| Sbjct 744 CTCCAGTGTGATGGTCTTGCCAGTCAGTGTCTTGACAAAGATTTGCATG 792 Score = 104 bits (114), Expect = 2e-17 Identities = 95/120 (79%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || || || | ||||||||| || || ||||||||||||||| ||||| | Sbjct 792 GCCACCACGCAGGCGCAGCACCAGATGGAGTGTAGACTCCTTCTGAATGTTGTAGTCTGC 851 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 |||||||| | || || ||||||||||||||||| ||||| ||||| ||||| | ||| Sbjct 852 TAGGGTGCGGCCATCTTCTAGCTGCTTGCCGGCGAAAATCAGACGCTGCTGGTCAGGGGG 911 Score = 91.5 bits (100), Expect = 1e-13 Identities = 92/120 (77%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || || || |||||||| || || || ||||||||| ||||| ||||| | Sbjct 1312 GCCACCACGCAGGCGCAACACCAGGTGGAGTGTAGACTCCTTCTGGATGTTGTAGTCTGC 1371 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 || ||||| | || || ||||||||||| ||||| ||||| ||||| ||||| | ||| Sbjct 1372 TAGTGTGCGGCCATCTTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCAGGGGG 1431 Score = 86.0 bits (94), Expect = 6e-12 Identities = 91/120 (76%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || || || | ||||||||| || || ||||||||| ||||| ||||| | Sbjct 1844 GCCACCACGCAGGCGCAGCACCAGATGGAGTGTAGACTCCTTCTGGATGTTGTAGTCTGC 1903 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 || ||||| | || || ||||||||||| || || ||||| ||||| ||||| | ||| Sbjct 1904 TAGTGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCAGGGGG 1963 >seq334 Length=28022 Score = 132 bits (146), Expect = 4e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| ||||| || || ||||||||||| || ||| ||||||||| ||||| ||||| | Sbjct 27870 GCCACCGCGCAGGCGCAACACCAGATGAAGTGTGGACTCCTTCTGGATGTTGTAGTCTGC 27811 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 |||||||| | || || ||||||||||| || || ||||| ||||| ||||| | ||| Sbjct 27810 CAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCAGGGGG 27751 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCAC 41814 | | |||||||||| || || ||| | | | || ||||| |||||| Sbjct 27750 GATACCCTCCTTGTCCTGAATCTTGCTCTTGACATTCTCAATGGTATCGCTGCTCTCCAC 27691 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| || || || || || ||||| ||||| || || || ||||| Sbjct 27690 CTCCAGAGTGATGGTCTTGCCAGTCAGTGTCTTGACAAAGATTTGCAT 27643 Score = 84.2 bits (92), Expect = 2e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | ||||||||| || || ||||||||| ||||| ||||| | Sbjct 27641 CCACCACGCAGGCGCAGCACCAGATGGAGTGTAGACTCCTTCTGGATGTTGTAGTCTGCT 27582 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 || ||||| | || || ||||||||||| ||||| ||||| || || ||||| | ||| Sbjct 27581 AGAGTGCGGCCATCTTCCAGCTGCTTGCCAGCGAAGATCAGACGTTGCTGGTCAGGGGG 27523 >seq11472 Length=8128 Score = 118 bits (130), Expect = 1e-21 Identities = 137/185 (74%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| | |||||||||||| ||| ||||||||| ||||| ||||| | Sbjct 5159 GCCTCCACGCAGACGCAGCACCAGATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCTGC 5100 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 |||||||| | || || ||||||||||| ||||| ||||| ||||| ||||| | || Sbjct 5099 AAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCAGGAGG 5040 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCAC 41814 || | ||||| ||| ||| || ||| | | | |||||||| |||||||| Sbjct 5039 AATCCCTTCCTTATCCTGGATCTTGCTCTTTACATTCTCAATGGTGTCGCTAGACTCCAC 4980 Query 41815 CTCCA 41819 || || Sbjct 4979 CTACA 4975 Score = 104 bits (114), Expect = 2e-17 Identities = 96/122 (79%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| | |||||||||||| ||| ||||||||| ||||| ||||| | Sbjct 6060 GCCTCCACGCAGACGCAGCACCAGATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCTGC 6001 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 |||||||| | || || ||||||||||| || || ||||| ||||| ||||| | || Sbjct 6000 AAGGGTGCGACCATCCTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCAGGAGG 5941 Query 41755 AA 41756 || Sbjct 5940 AA 5939 Score = 98.7 bits (108), Expect = 9e-16 Identities = 90/114 (79%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| | |||||||||||| ||| ||||||||| ||||||||||| | Sbjct 5599 GCCTCCACGCAGACGCAGCACCAGATGCAGGGTGGACTCCTTCTGGATGTTATAGTCTGC 5540 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC 41748 || ||||| | || || ||||||||||| || || |||| ||||| ||||| Sbjct 5539 AAGAGTGCGACCATCCTCCAGCTGCTTGCCAGCAAAGATCAAACGCTGCTGGTC 5486 Score = 96.9 bits (106), Expect = 3e-15 Identities = 94/121 (78%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| |||||||||||||| || ||||||||| ||||| ||||| | Sbjct 6952 CCTCCACGCAGACGCAACACCAGATGCAGGGTAGACTCCTTCTGGATGTTGTAGTCTGCA 6893 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || || ||||||||||| || || ||||| ||||| ||||| | ||| Sbjct 6892 AGAGTGCGACCATCCTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCAGGAGGA 6833 Query 41756 A 41756 | Sbjct 6832 A 6832 Score = 93.3 bits (102), Expect = 4e-14 Identities = 92/119 (77%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | |||||||||||| || ||||||||| ||||| ||||| | Sbjct 7539 CCTCCACGCAGACGCAGCACCAGATGCAGGGTAGACTCCTTCTGGATGTTGTAGTCTGCA 7480 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 || ||||| | || || ||||||||||| || || ||||| ||||| ||||| | ||| Sbjct 7479 AGTGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCAGGGGG 7421 Score = 89.7 bits (98), Expect = 5e-13 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| | ||||||||||| || ||||||||| ||||| ||||| | Sbjct 6523 GCCTCCACGCAGACGCAGTACCAGATGCAGGGTAGACTCCTTCTGGATGTTGTAGTCTGC 6464 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 || ||||| | || || ||||||||||| || || ||||| ||||| ||||| | || Sbjct 6463 AAGAGTGCGGCCATCCTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCAGGAGG 6404 Query 41755 AA 41756 || Sbjct 6403 AA 6402 >seq7244 Length=2690 Score = 98.7 bits (108), Expect = 9e-16 Identities = 92/117 (79%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 || ||||||| || ||||||||| ||||||||||| | |||||||| | || || Sbjct 616 ACAAGATGCAAGGTAGACTCCTTCTGGATGTTATAGTCTGCAAGGGTGCGGCCATCTTCC 675 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCC 41770 |||||||||||||| ||||||| ||| || || |||| || | || |||||||||| Sbjct 676 AGCTGCTTGCCGGCAAATATCAAGCGTTGCTGATCCGGTGGGATGCCCTCCTTGTCC 732 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462210238970000