Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cymbomonas_20tetramitiformis_20[genbank_20GCA_5F001247695.1_202015- 08-05] 40,243 sequences; 281,270,454 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq195 116 5e-21 >seq195 Length=29407 Score = 116 bits (128), Expect = 5e-21 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 146066 AATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCA 146125 || || | |||||| || |||||||| |||||| ||||| | ||||| | || Sbjct 27208 AACACGAGATGTAAGGTTGATTCTTTTTGTATATTGTAATCACCCAATGTTCTCCCGTCT 27149 Query 146126 TCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCT 146185 || ||||||||||| ||||||||||||| ||| || || || || |||||||| ||||| Sbjct 27148 TCCAATTGTTTTCCTGCAAAAATCAATCGTTGTTGGTCGGGTGGCATTCCTTCCTTATCC 27089 Query 146186 TGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACTTCTAGTGTGATTGTT 146245 || ||||||||| ||| || || ||||| || ||| Sbjct 27088 TGGATTTTAGACTTTACGTTATCTATCGTATCTGAAGATTCAACGTCGAGTGTTATAGTT 27029 Query 146246 TTACCTGTTAATGTTTTAATGAATATTTGCAT 146277 ||||||||||| ||||| || ||||||||||| Sbjct 27028 TTACCTGTTAAAGTTTTGATAAATATTTGCAT 26997 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 743152378338560