Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cymbomonas_20tetramitiformis_20[genbank_20GCA_5F001247695.1_202015- 08-05] 40,243 sequences; 281,270,454 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq319 89.7 6e-13 >seq319 Length=35189 Score = 89.7 bits (98), Expect = 6e-13 Identities = 78/96 (81%), Gaps = 2/96 (2%) Strand=Plus/Plus Query 33582 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGT 33641 || || || |||||||| || |||||||||| ||||||||||||||| |||||||| Sbjct 33476 CAGGCAAAGTCGCAGTGGAGTCCCTCGTCTCGGGAAATTAATTCGTTAGAGAACGTGAGC 33535 Query 33642 CCGGGCATTAGGCCACGCTTTTTAAGCCA--AAATA 33675 |||||||||| ||||| || || ||||| ||||| Sbjct 33536 CCGGGCATTAATCCACGTTTCTTCAGCCAGTAAATA 33571 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629500778129040