Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cymbomonas_20tetramitiformis_20[genbank_20GCA_5F001247695.1_202015- 08-05] 40,243 sequences; 281,270,454 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq22337 86.0 9e-12 >seq22337 Length=5046 Score = 86.0 bits (94), Expect = 9e-12 Identities = 77/97 (79%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019 || ||||| |||||||||| || ||||| | |||||| ||||||||||| || ||| Sbjct 4950 CACGCGAAGTCGCAGTGCAAGCCTTCGTCACGGGAAATTAGCTCGTTGGAAAAGGTAAGT 5009 Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGG 50056 |||||||| ||||| || || || | |||| |||||| Sbjct 5010 CCGGGCATCAGGCCGCGTTTCTTCAACCAATATATGG 5046 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 717907483858520