Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cymbomonas_20tetramitiformis_20[genbank_20GCA_5F001247695.1_202015- 08-05] 40,243 sequences; 281,270,454 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq8895 84.2 2e-11 >seq8895 Length=8815 Score = 84.2 bits (92), Expect = 2e-11 Identities = 146/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 23985 AACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAG 24044 |||| ||||| | ||||| ||||| | ||||| || | || ||| | || || ||| Sbjct 574 AACACCATGCAGATCTTTGTGAAAACGCTTACTGGTAAGACCATCACCTTGGAGGTAGAG 633 Query 24045 GCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCC 24104 ||||| || || | ||||| || ||| ||||||||||| || || || Sbjct 634 AGTTCTGACACTATTGACAACGTCAAGGCCAAAATTCAAGACAAAGAAGGAATCCCACCT 693 Query 24105 GATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGA-TGACAGAAACGTCAGCGA 24163 || ||||| ||| |||| | || ||||| ||||| ||||| | | || || | || Sbjct 694 GACCAACAAAGATTGATATTCGCGGGCAAACAACTGGAAGACGGGCGGACAC-TGGCTGA 752 Query 24164 TTATAACATTCAAAAAGAATCTACAATTCA 24193 ||| ||||| |||||||||||||| |||| Sbjct 753 TTACAACATCCAAAAAGAATCTACTCTTCA 782 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429725132917665