Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cymbomonas_20tetramitiformis_20[genbank_20GCA_5F001247695.1_202015- 08-05] 40,243 sequences; 281,270,454 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq7861 156 8e-33 >seq7861 Length=6948 Score = 156 bits (172), Expect = 8e-33 Identities = 484/738 (66%), Gaps = 26/738 (4%) Strand=Plus/Plus Query 212548 GCATC-ACCGTAAACTGTACTGGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCG 212606 ||||| || || |||| | | ||| || |||| ||||| || ||||||||||| ||| Sbjct 2526 GCATCCACGGTGAACTTGATGGCATCTGCTGCAGATTTGGTACGGAGATAGTACATACCG 2585 Query 212607 GTCTTTAGGCCCTTGCCCCAGCCGTGCATGTGCATTGCTGTGAGTTTCTTCAGCTTAATA 212666 ||||| | ||||| | ||| | || | ||||| || || || || | | Sbjct 2586 GTCTTCAAACCCTTCCTCCACGCATGGAAGTGCAGACTGGTCAGCTT--TCCGA-----A 2638 Query 212667 TTCTGGTCATCCTCGTGGCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGG 212726 | ||| |||| || || || | ||| | | ||| |||||||| ||||| | Sbjct 2639 GT-TGG-CATCA--GT----CATGTGCACGTTAAAGCTCTGGCTCTGGTCAATGAAGGCA 2690 Query 212727 GCCCTGTCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAG 212786 | |||||||| | |||||||| || || ||| || |||||||| |||||| | Sbjct 2691 CCTCTGTCAGCAGACATGTCTACGAGTGTTCGCTGTTTGATTTCCCACACTGTCTTGTAC 2750 Query 212787 ATTTCTTTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCCCCTGTGTATGGTC 212846 | ||| ||||| || |||| | |||||||||||||| || |||| | | Sbjct 2751 AGACGTTTAAGGTCATCGGGGATGTTAGGGATGTTCTGCACGCTGCCGTTGTGCGCGATT 2810 Query 212847 AGCTGCAGGCGCATGTCCTCGTTCCAGAGGCCCCTGGTCTC-CAGGCACTTGACCAGGTG 212905 || |||||| | ||||| ||||| ||||| || | |||| || ||| Sbjct 2811 AGAATGTTCTTCATGTCTGCATTCCAAAGGCCTA-GGTCTGTCAAGTCGTTGAGCAAGTG 2869 Query 212906 AGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTA 212965 |||| || | ||| || || |||||||||| || | ||| ||||| Sbjct 2870 CTGGTTCACCACGGTGAACTCGCCGCTCAGCACCCTCCGGGCATAGATGTTGCTTGTGTA 2929 Query 212966 GGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGC 213025 ||||||| || ||||||||| ||||| ||||| | ||| ||| |||||||||||||| Sbjct 2930 AGGCTCGAAGCACTCGTTGTTGCCCAGGATCTGCGAGGTGGAGGCCGTGGGCATGGGAGC 2989 Query 213026 CACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTC 213085 ||| ||||| ||| | ||| ||||||| | | ||| ||| || | |||||||| Sbjct 2990 CACGAGGAGGGAGTTGCGCACGCCGTGCTTGGCAATGTCCTCCCGGAGACCAGCCCAGTC 3049 Query 213086 CCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATG-CCTT 213144 | | | || || |||| || ||||| || |||| || || |||| Sbjct 3050 GTGACGGTCTGAGGGGGCCTC------AACTCCCCACAGATCGTGCTGC-AGCTGACCTT 3102 Query 213145 TGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGG 213204 |||||| ||||||||| | || | || | || | ||||| ||| |||| ||||| Sbjct 3103 TGCTCATGGGGCTGCCTTCATACGTCTCATAAGTACCCTCCTCCTGGGCTAGCTGGCAGG 3162 Query 213205 ACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCT 213264 || | || || ||| |||| | || ||||| || ||| |||| |||| | || | Sbjct 3163 ACTCGGTGAGTGCCGCGAAGTAAACAGTCTCAAAGATTTCCTTGTTCAGCTGGATTGCTT 3222 Query 213265 CTGGGGACGTGAAGGGCA 213282 | ||||| |||||||| Sbjct 3223 CGGGGGAGTCGAAGGGCA 3240 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931064204069120