Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cymbomonas_20tetramitiformis_20[genbank_20GCA_5F001247695.1_202015- 08-05] 40,243 sequences; 281,270,454 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq7861 93.3 8e-14 >seq7861 Length=6948 Score = 93.3 bits (102), Expect = 8e-14 Identities = 111/151 (74%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 221102 TTGACCATGTGCTTGTTCACCACTTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGG 221161 |||| || ||||| ||||||||| ||| || || |||||||||| || | | Sbjct 2859 TTGAGCAAGTGCTGGTTCACCACGGTGAACTCGCCGCTCAGCACCCTCCGGGCATAGATG 2918 Query 221162 TTAGAAGTGAACGGTTCGATGCTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTG 221221 || ||| | || |||| || ||||||||||||||||||||| | ||| ||| ||| Sbjct 2919 TTGCTTGTGTAAGGCTCGAAGCACTCGTTGTTGCCCAGGATCTGCGAGGTGGAGGCCGTG 2978 Query 221222 GGCATGGGTGCCACCAGCAGACTGTTGCGCA 221252 |||||||| ||||| || || |||||||| Sbjct 2979 GGCATGGGAGCCACGAGGAGGGAGTTGCGCA 3009 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928377556233920