Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cymbomonas_20tetramitiformis_20[genbank_20GCA_5F001247695.1_202015- 08-05] 40,243 sequences; 281,270,454 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq7861 86.0 2e-11 >seq7861 Length=6948 Score = 86.0 bits (94), Expect = 2e-11 Identities = 119/167 (71%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 256134 AGCACGGACTGCGCAACTCGCAACGATTGGCGCCCATGCCAACCGCCAGCACCGCTCAAA 256193 ||||||| |||||||||| | | |||| |||||||| || ||| |||| | || | Sbjct 3018 AGCACGGCGTGCGCAACTCCCTCCTCGTGGCTCCCATGCCCACGGCCTCCACCTCGCAGA 2959 Query 256194 TCCTGGGTAACGTGGAAAGCATCGAACCCCTGACTACCAACTTCTTCTCGCGCCGCGTTC 256253 ||||||| ||| || || |||| || || | |||| ||| | || | || | Sbjct 2958 TCCTGGGCAACAACGAGTGCTTCGAGCCTTACACAAGCAACATCTATGCCCGGAGGGTGC 2899 Query 256254 GCTCCGGCGAGTTCGCCGTGGTGAACCAGTACTTGGTGGACGACTTG 256300 |||||||||| |||||||||||||| ||||| | |||||||| Sbjct 2898 TGAGCGGCGAGTTCACCGTGGTGAACCAGCACTTGCTCAACGACTTG 2852 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1587517032615135