Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cymbomonas_20tetramitiformis_20[genbank_20GCA_5F001247695.1_202015- 08-05] 40,243 sequences; 281,270,454 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq18528 86.0 5e-12 >seq18528 Length=5764 Score = 86.0 bits (94), Expect = 5e-12 Identities = 110/149 (74%), Gaps = 6/149 (4%) Strand=Plus/Minus Query 4548 CACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTA--GAAA-ACGTT 4604 ||||||||||||| ||||| |||||| || | |||| ||||||| |||| || Sbjct 4197 CACGCAAAATCACGATGCATACCTTCATCACGAGCGATCAATTCGTTACTGAAACAC--- 4141 Query 4605 AATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAG 4664 || |||||||| |||||| ||| || | ||||||| || ||| | ||||||| Sbjct 4140 AAACCGGGCATCAAACCTTGCTTCTTCATGTAAAATATTGCACAAAAGCTCGCAGAAAAA 4081 Query 4665 AATATGCCTTCTACGGCGGCAAACGCTAC 4693 || |||||||| ||| ||||||||| || Sbjct 4080 AAGATGCCTTCGACGCAGGCAAACGCCAC 4052 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426840148585919