Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cymbomonas_20tetramitiformis_20[genbank_20GCA_5F001247695.1_202015- 08-05] 40,243 sequences; 281,270,454 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq7861 93.3 6e-14 >seq7861 Length=6948 Score = 93.3 bits (102), Expect = 6e-14 Identities = 284/439 (65%), Gaps = 0/439 (0%) Strand=Plus/Plus Query 78106 TATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCT 78165 || ||| ||||| ||||| || || || || | | | || ||| || ||| |||| Sbjct 4627 TACCAGCGTGCCAAGGTTCAAGGTAGATGGCGAAAGCACCCTTTCGCTTTCCACCACCCT 4686 Query 78166 GATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATG 78225 |||| | ||| | ||| |||| || | || | | ||| || | || ||||| || | Sbjct 4687 GATCGACATAGCGGGCAGTGTCGTTGAAGACACGAAGCATAGGGACGATGCCGTTCGAGG 4746 Query 78226 TTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCTA 78285 |||| || || || ||| ||||| | | | || || ||| ||| | || | Sbjct 4747 TTCCGTTGGTGCCCCGAATGTAACTACTGGTAGAACGGATGTTATGGATGTTGAGGCCGA 4806 Query 78286 TTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTA 78345 | ||||| || |||| || ||| ||| || |||| || ||||||||||| || | Sbjct 4807 TCCCTCCGGCGCTCTTTGAAATTGCAGCACACTCCTTCAGCGTGTCGTAGATACCTTCGA 4866 Query 78346 TACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTG 78405 ||||||| || |||| || | || ||||| || ||| | | || || | Sbjct 4867 TACTGTCGTCTTTCATTGCAATCAAGAAGCAGCTGCTCAGCTGAGGGCGTGGCGTGCCGG 4926 Query 78406 CATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTT 78465 | || || | || || || || || || ||||| || | || | |||||| | Sbjct 4927 CGTTGAAGAGCGTAGGTGACGCGTGTGTGAACCAACGCTCGCTCATAAGGTGGTATGTCT 4986 Query 78466 CAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAACATATGCT 78525 |||||| || |||| | ||| ||||| || || || || ||||| | ||| |||| Sbjct 4987 TGATAGCTTGCTCGATGTTCTCTTGGTGAATGCCCACGGCGACCCGCATAAGCATGTGCT 5046 Query 78526 GAGGTCTTTCAACCGTCTT 78544 |||| | |||||| |||| Sbjct 5047 GAGGACGTTCAACAATCTT 5065 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694319355543520