Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_000935.1 Length=36524 Score E Sequences producing significant alignments: (Bits) Value seq2091 104 5e-18 >seq2091 Length=8365 Score = 104 bits (114), Expect = 5e-18 Identities = 302/457 (66%), Gaps = 11/457 (2%) Strand=Plus/Minus Query 25127 GATATGGTGAATAAAGACAGGGCGGTTATGTCCGGCTTGTGCCTGACGAGTCGGGCCTAT 25186 ||| | ||| || ||||| || |||| || ||||| || ||| || || || || || Sbjct 5804 GATGTAGTGGATGAAGACGGGCCGGTCGTGGCCGGCCTGCATCTGGCGCGTTGGTCCGAT 5745 Query 25187 ACGTTCGATAATTTGCTGGTACTGCTCTAAATCCCACCAGTGGGaaaaaaaGACCAGAAT 25246 |||||||| || ||||||| | ||| | | ||| | || || ||||| || Sbjct 5744 GCGTTCGATGATCTGCTGGTGTTCCTCCAGGTTCCAGTTCACGCTGAAGAACACCAGGAT 5685 Query 25247 ATTACCGCCGTCCTGTAAATTTAAGCCGTGTCCACAGCTTGCGGGGTGAGCAAAGAGCAA 25306 || ||||||||||||| || | |||||| || ||| || ||||| || || |||| Sbjct 5684 GTTGCCGCCGTCCTGTAGGTTCAGGCCGTGGCCGGCGCTGGCCGGGTGGGCGAACAGCAC 5625 Query 25307 GGGGATTTTGCCATTATTCCAGTCGGTAAGGGTTCGGGGGTTGGCATCTAAATTTTTTCC 25366 |||||| ||||| ||||||||| || || | || | || | | || Sbjct 5624 GGGGATCTTGCCGGCGTTCCAGTCGCGCAGCGTCTGCGGATCCTTGTCGAGCTGGCGGCC 5565 Query 25367 TTTGGGAAAGGCTTTTAATAAACGCTCGAGGTCATGTTTCCAGTGGTAAGCGACCAGTAC 25426 ||||| || || || | | ||| | ||||| || ||||||| || ||||| || Sbjct 5564 CTTGGGGAACGCCTTAAGCAGGCGCGCCAGGTCGGACTTGAAGTGGTAGGCCACCAGCAC 5505 Query 25427 TGGCGTCCCTCCTGATTCATTAACAAT-ACT--CTCTAGCGCCTGAATTTTGGCATCGTG 25483 ||| | || | | ||| | |||| ||| || |||||||| | ||| | ||||| Sbjct 5504 CGGCATGCCGGCCGCTTCCT---CAATGACTTCGTCCAGCGCCTGCAGCTTGACGTCGTG 5448 Query 25484 TATCTCTGTCCAATTGCG-ATTGTCATCG-CTA--TAAATAGCGCCACTGGCAATTTGCA 25539 | ||| | || | |||| ||| ||| ||| || ||||| |||| | |||| Sbjct 5447 CACCTC-GGCCCACTGCGTGCCGTCCTCGCCTACGTAGGCGGCGCCGTTGGCCAGCTGCA 5389 Query 25540 AAATTTTTATTGTTTTGGCCGCCGCGTTTAACGCTTC 25576 | || || || |||||||||||||| ||||| || Sbjct 5388 AGCACTTCATCGTCTTGGCCGCCGCGTTGAACGCCTC 5352 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 116744109642468