Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq7728 118 9e-22 seq12 113 4e-20 seq1162 107 2e-18 seq73 87.8 2e-12 seq1176 86.0 5e-12 >seq7728 Length=1087 Score = 118 bits (130), Expect = 9e-22 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||| ||| | ||| ||||| || ||||||||||| || | ||||| ||||| Sbjct 256 ACCAGGTGCAATGTGGACTCCTTCTGAATGTTGTAGTCCGAAAGCGTGCGGCCGTCCTCC 197 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| || || || ||||||| ||||||||||| || || || || |||||||| Sbjct 196 AGCTGCTTGCCCGCAAAGATGAGGCGCTGCTGATCAGGGGGGATCCCTTCCTTGTCCTGG 137 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || ||||| || || | |||| ||||| || ||| || || | ||| | || ||| Sbjct 136 ATCTTTTGCTTCACATTCTCGATTGTGTCGCTGGGCTCAACATCTAGGGTGATGGTCTTG 77 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742 || ||||| || || || || |||||||||||| Sbjct 76 CCCGTCAGGGTCTTGACGAAGATCTGCATGGCT 44 >seq12 Length=84225 Score = 113 bits (124), Expect = 4e-20 Identities = 95/117 (81%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||||||||| || ||||| ||||| |||||||| || || |||||| |||||| Sbjct 63 CACCAAGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCAGCCAGGGTGCGCCCATCCTC 122 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 ||||| || || || |||| ||||||||||| |||||||| |||||||||||||| Sbjct 123 AAGCTGCTTGCCCGCAAAGATCAGACGCTGCTGGTCGGGAGGAATGCCCTCCTTGTC 179 >seq1162 Length=13745 Score = 107 bits (118), Expect = 2e-18 Identities = 94/117 (80%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||| ||||| || ||||| ||||| |||||||| || || |||||| |||||| Sbjct 13623 CACCAGGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCAGCCAGGGTGCGCCCATCCTC 13682 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 ||||| || || || |||| ||||||||||| |||||||| |||||||||||||| Sbjct 13683 AAGCTGCTTGCCCGCAAAGATCAGACGCTGCTGGTCGGGAGGAATGCCCTCCTTGTC 13739 >seq73 Length=47289 Score = 87.8 bits (96), Expect = 2e-12 Identities = 89/116 (77%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||| ||| | || |||||||| || ||| |||| ||| || ||||| |||||| Sbjct 32418 ACCAGGTGAAGCGTGGACTCTTTCTGGATGCTGTAGTCGGCCAGGGTGCGGCCATCCTCA 32477 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 ||||| || || | | |||| | |||||||| |||||||| |||||||||||||| Sbjct 32478 AGCTGCTTGCCCGTGAAGATTAAGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTC 32533 >seq1176 Length=13603 Score = 86.0 bits (94), Expect = 5e-12 Identities = 91/120 (76%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585 || ||||| ||||| || ||||| || || |||||||| || || ||||| ||| Sbjct 12509 CAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGGCCATC 12568 Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 ||| ||||| || || || | || || |||||||| || ||||| |||||||||||||| Sbjct 12569 CTCCAGCTGCTTGCCCGCAAAAATCAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTC 12628 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 || ||||| | | || ||||| ||||| || ||||| || || |||||||| || | Sbjct 13254 CCGCCGCGCAGGCGCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCC 13313 Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631 | ||||| |||||| ||||| || || || | || || |||||||| || || || Sbjct 13314 AGGGTGCGGCCATCCTCCAGCTGCTTGCCCGCAAAAATCAGGCGCTGCTGGTCAGGGGGG 13373 Query 118632 ATGCCCTCCTTGTC 118645 |||||||||||||| Sbjct 13374 ATGCCCTCCTTGTC 13387 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433788106823308