Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_002484.2 Length=56426 Score E Sequences producing significant alignments: (Bits) Value seq75 277 6e-70 seq424 95.1 4e-15 seq240 82.4 3e-11 >seq75 Length=46716 Score = 277 bits (306), Expect = 6e-70 Identities = 513/740 (69%), Gaps = 21/740 (3%) Strand=Plus/Plus Query 36828 TCAGCGGCGGCCTTGGCTTCTGCTTCGCGGCGAGCGGTGGCGTCGCGTTCTTCCTGGGCT 36887 || || |||||| ||| || ||||||||||| |||| ||||||||| || ||||||| Sbjct 104 TCGGCAGCGGCCAGGGCCTCGGCTTCGCGGCGGGCGGCGGCGTCGCGCTCGGCCTGGGCG 163 Query 36888 CGGCGTTCGGCGGCAAGGCGCTCAGCT---TCAGCCGCTTCGCGGGCAATACGCTCCTCG 36944 ||| || || | ||||| || || |||||||||||||| || ||||| || Sbjct 164 CGGGTCTCTGCTTC---GCGCTGGGCGCGCTCGGCCGCTTCGCGGGCGATGCGCTCTTCA 220 Query 36945 CGCTCCTTCTGCTCGCGGGCGGCAGCTTCGGCGCGCAGTCGCTCCAGTTCGGCCTGCTCG 37004 || |||||||| |||| |||| | |||| ||||| ||| ||||||||||||||||| Sbjct 221 CGTTCCTTCTGTGCGCGCTCGGCTTCAGCGGCACGCAGGCGCGCCAGTTCGGCCTGCTCG 280 Query 37005 GCTTCATACTTCTCGCGTGCAACGAGGGCTTCGCG-CAGCGCGGCCAGGGCCTTGCCCTT 37063 || || ||||||||||| || | ||||||| ||| ||| | || |||| | |||| Sbjct 281 GCGTCGTACTTCTCGCGCGCCGCCAGGGCTT-GCGTCAGGGAATCCTGGGCGCGGGCCTT 339 Query 37064 GGTACGGGCTGCCTCGGTTTCGAACTCTTCCCAGTCCTCGCCAATCAAGAGGCCTTCCAG 37123 | ||| ||||||| ||| | || |||||| | | | | | || | | || Sbjct 340 GACGCGGTGCGCCTCGGCCTCGTATTCCTCCCAGGACGCATCCACGGCGCGGGCATTCAC 399 Query 37124 CCACTCAATGTTGGCTTTCAACTCGGTCGAATCTAGGTCGCGGCATTC--CAG-GCGCAT 37180 | || ||| | || || |||||||| ||| ||||||||| || | | ||||| Sbjct 400 CTCTTCGATGGTCGCGCGCAGCTCGGTCGCATCCAGGTCGCGGTGCTCGTCGGCGCGCAG 459 Query 37181 CTTGATCTGATCGATGCCGGCCTGGTGTTTGGCCTTGCGCATTTCCTCGCGCTGC-TCCC 37239 || | |||| || |||||| || ||| ||||||| || || |||| Sbjct 460 GCGGAACCACTCGACACCCTGCTGGTGGCGCTGCTCGCGTGCTTCCTCG-GCGGCTTCCC 518 Query 37240 AATCCGTTAGGGGCTGGCGTACCTCTGCCTGCCAG-GAGTCCAGCAGGTCACGCATGCGC 37298 | | || || ||| ||| |||||| | ||||| | |||||| ||| ||||||||| Sbjct 519 ATGCGGTCAGCGGCGCGCGCACCTCT-TCGGCCAGCGCGTCCAGGGTGTCGCGCATGCGC 577 Query 37299 TTACGCTCGGCGTCGACCTTCTTCGGAACTTCCTTCAGCTCGGCGACCAGTTCCTTGCCC 37358 || ||||| ||||||| ||| || || ||||| || ||| ||||||| | ||||||| Sbjct 578 TTGCGCTCCGCGTCGATGCGCTTGGGGACGTCCTTGAGTTCGTCGACCAGCTGCTTGCCC 637 Query 37359 AGGTTGTCCAGCGCCGTCTTGGA---GCGGGCTACCTTGTAGGCGATGGAGGCGACGGCC 37415 ||| ||||||||| ||||| || |||| |||||| | || | | |||| |||| Sbjct 638 AGGGCGTCCAGCGCGGTCTTCGATTTGCGG---ACCTTGAACGCCAGGCTGGCGGTGGCC 694 Query 37416 TCTCTGCCCTTGCGGGTAGTGACGTCTGGCACGAAGCCGTCGATCTCTTCGCGAATCTTG 37475 || | ||| || ||| | | ||| |||||| |||| | || |||| |||||| Sbjct 695 TCACGGCCTTTCTTGGTCGACATGTCAGGCACGTGGCCGGACACTTCGGCGCGGATCTTG 754 Query 37476 GCCAGGAACGGGTCAAGGCCATTGGCGGCCGAGTAGACCTGTAGTGCGGTTTCTTTGGCC 37535 ||||| | || || ||||| ||| || || |||| || |||||||| | || | Sbjct 755 GCCAGCCAGGGCTCCAGGCCGCTGGGCTTGGAATACACCTCCAGCGCGGTTTCCTGGGGC 814 Query 37536 GGCACTTCGACCAATTGGGT 37555 |||| |||| | | || ||| Sbjct 815 GGCAGTTCGGCGAGTTCGGT 834 >seq424 Length=24479 Score = 95.1 bits (104), Expect = 4e-15 Identities = 152/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 36501 CCTCAGTAGTTGATTGTGATGTGAGGAACCTTGCGCTGAGCGATCAGTGTGATCGCCTGC 36560 ||||| ||| |||| ||||| || | || || |||||||| |||| ||||||| Sbjct 24224 CCTCAATAGGTGATACGGATGTTGGGGATGGCGCCCTTGGCGATCAGCGTGACCGCCTGC 24283 Query 36561 TTGGCGCATTCCCCGGGCATGCCGCCGGCGATCAGGGCCGCCAGGGCTTCGTTGTTGATG 36620 |||||||| ||| ||||||||||| | || | ||| ||||||| | ||||||| Sbjct 24284 TTGGCGCAGTCCTCGGGCATGCCGGCCAGGACAAAGGCATCCAGGGCGGTGCGGTTGATG 24343 Query 36621 GCTTTCTTGTGGGCCTTGTCGGATTCTCGTGCTGCTGCCTCGCGCT-CGATCCTGGCCTG 36679 | |||||| |||||||||| || || || | ||| ||| | | |||||| Sbjct 24344 CTTGCCTTGTGCGCCTTGTCGGCCTCGCGGCGCGCGGTTTCG-GCTGCCGCCGCGGCCTG 24402 Query 36680 CTCGTCGGCCTGCCGTTGGCGCTCTGCGGCAGTGGC 36715 ||||||||| || ||||| || ||||| | ||| Sbjct 24403 CTCGTCGGCAATGCGCTGGCGTTCGGCGGCGGCGGC 24438 >seq240 Length=32197 Score = 82.4 bits (90), Expect = 3e-11 Identities = 104/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 48940 TGCCCGGTGCTCCCGCTCTGCCAGCTCAACCGCGGATGTGAGTCTCGCCCGGATAAGCGC 48999 |||||| || || |||| | ||||| ||||| | ||| || || | ||||| Sbjct 9005 TGCCCGCTGATCGCGCTGTCGCAGCTGAACCGAAGCCTGGAGCAGCGTCCCAACAAGCGT 9064 Query 49000 CCGGTGCTCAGCGACCTACGCGAGTCCGGCGCCATCGAGCAAGACGCGGACATCGTGATG 49059 || ||| | |||||||| ||||| || ||||||||||| || ||||| ||| | | || Sbjct 9065 CCCGTGATGAGCGACCTGCGCGAATCGGGCGCCATCGAACAGGACGCCGACGTGATCCTG 9124 Query 49060 TTCGTGTACCGCGATGAAGTCTA 49082 ||| | |||||||| || ||||| Sbjct 9125 TTCATCTACCGCGACGAGGTCTA 9147 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 180424460190744