Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_004686.1 Length=56276 Score E Sequences producing significant alignments: (Bits) Value seq923 102 3e-17 >seq923 Length=16245 Score = 102 bits (112), Expect = 3e-17 Identities = 125/169 (74%), Gaps = 4/169 (2%) Strand=Plus/Plus Query 40008 TGCTCCCAGGTCGATCCCGAGCTGTTCTTCCCCGAAAAGGGAGGAA--ACGCGAAACCCG 40065 ||||| ||| || |||||| |||||||||||| ||||| ||| || || || | Sbjct 6886 TGCTCGCAGACGGACCCCGAGGCGTTCTTCCCCGAGAAGGGCGGATCGACCCGCGAC--G 6943 Query 40066 CAAAGCGGATCTGCGGTATGTGCGACGTCCGGGACGAATGCCTTCAGTGGGCGCTGGACA 40125 | ||||| |||||| | ||||||||||| | ||||||||| | | ||||| || | Sbjct 6944 CCAAGCGCATCTGCTCCACCTGCGACGTCCGCGGCGAATGCCTCGACTACGCGCTCGAGA 7003 Query 40126 ACAACGAACAGTTCGGCATCTTCGGCGGCCTGTCCGAGCGTGAACGCCG 40174 || |||||| ||||| |||| ||||| ||| |||||| || ||||| Sbjct 7004 ACGACGAACGCTTCGGTATCTGGGGCGGGCTGAGCGAGCGGGAGCGCCG 7052 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 179944505785044