Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_004813.1 Length=57930 Score E Sequences producing significant alignments: (Bits) Value seq313 89.7 2e-13 >seq313 Length=28640 Score = 89.7 bits (98), Expect = 2e-13 Identities = 197/293 (67%), Gaps = 7/293 (2%) Strand=Plus/Plus Query 44327 TACCATATCCGCGGTCGCATCATTCAGGTACCGTCAAACTATGACCCGGAAAAACGCACT 44386 ||||| | ||||| |||||||| | ||| ||||| |||||| ||||||| ||| Sbjct 19524 TACCACGTGCGCGGCCGCATCATCCGGGTGCCGTCCAACTATCACCCGGACCTGCGCCGC 19583 Query 44387 TACAGCGGTATCTGGGACGGCAGCCTGAAACCGGCATACAGCAATAACCCGGCCTGGTGC 44446 || ||| | |||||||||| | | || | ||| | | ||| |||||||||||| Sbjct 19584 TATGACGGCGTGTGGGACGGCACCTTCAAGCTGGCCTGGACCAACAACCCGGCCTGGGTG 19643 Query 44447 CTGTGGGACATGCTGACCCACCCGCGCTACGGAATGGGAAAACGTCTGGGGGCGGCGGAT 44506 | | ||| | | | | || ||||| || |||| | || || |||| || | Sbjct 19644 TTCTACGACCTCATCAGCAACGACCGCTATGGCCTGGGCACGCGCGTGCCGGCG--GGCT 19701 Query 44507 G--TGGACAAGTGGGCGCTGTATGCCATCGGGCAGTACTGCGACCAGACGGTCCCGGATG 44564 | |||||||||||| ||||| ||||| | || |||||| ||| |||| || | Sbjct 19702 GGCTGGACAAGTGGGGCCTGTACCAGATCGGCCGCTATTGCGACGAGATGGTCGATGACG 19761 Query 44565 GTTTCGGGGGCACAGAGCCGCGGATGACCTTTAATGCGTACCTGTCACAACAG 44617 | ||||| || | || ||||| | |||| || | |||||| |||||| Sbjct 19762 GCTTCGGCGGAAAGGAACCGCGCTTCACCTGCAACGTCTACCTG---CAACAG 19811 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 185236803031896