Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_006548.1 Length=38439 Score E Sequences producing significant alignments: (Bits) Value seq1 441 2e-119 >seq1 Length=201307 Score = 441 bits (488), Expect = 2e-119 Identities = 452/588 (77%), Gaps = 2/588 (0%) Strand=Plus/Plus Query 26030 CCCATCATCCCCTGGATAGGGGGAAAGCGCCGCCTCGCTGAC-CGCATCTTCCCGCTTTT 26088 || |||||||||||| | || || ||||||||||| || ||| | ||||||| |||| Sbjct 59667 CCGATCATCCCCTGGTTGGGTGGCAAGCGCCGCCTGGCCGACAAGATTCTTCCCCATTTT 59726 Query 26089 CCCACGCCACTCCTGCTATGTCGAGCCTTTCGCAGGTGGGGCGGCACTGTTCTTCCTACG 26148 || | | || |||||||| |||||||||||||| || |||||||||||| | ||| | Sbjct 59727 CCTAAG-CATTCCTGCTACGTCGAGCCTTTCGCGGGCGGGGCGGCACTGCTGTTCGCCAG 59785 Query 26149 GCCGGTGCCGGCGGATGTGGAAGTGCTCAACGACATCAACGGCGACCTGGTCAACCTGTA 26208 ||||| |||||| | || || ||||| ||||| ||||||||||||||||||||||| || Sbjct 59786 GCCGGAGCCGGCCAAGGTCGAGGTGCTGAACGATATCAACGGCGACCTGGTCAACCTCTA 59845 Query 26209 CCGCGTCGTTCAGCATCATCTGGAAGAGTTCGTCCGCCAGTTCAAATGGGCGCTCAGCTC 26268 |||||| || ||||| || |||||||||||||| ||||||||||| |||||||| | | Sbjct 59846 CCGCGTGGTGCAGCACCACCTGGAAGAGTTCGTGCGCCAGTTCAAGTGGGCGCTGACCAG 59905 Query 26269 TCGCCAGGTCTTCAAGTGGCTGCAGGAGACCCGGCCGGAAACGCTGACCGACATCCAGCG 26328 || ||| | |||||||||| | | || || ||||| || |||||||| || || ||||| Sbjct 59906 CCGGCAGATGTTCAAGTGGCAGAAAGAAACGCGGCCCGAGACGCTGACTGATATTCAGCG 59965 Query 26329 CGCCGCGCGCTTTTACTACCTGCAGCAGAGCGCGTTCGGCGGCCGGGTCGATGGCCAGAG 26388 || || ||||| ||||||||| ||||| | ||| ||||| | | || || |||| Sbjct 59966 GGCGGCCCGCTTCTACTACCTGATGCAGAACTGCTTCAGCGGCAAGCTGGAGGGTCAGAC 60025 Query 26389 CTACGGAACCGCCACCACCTCACCGCCTGGGCTCAACCTGTTGCGCCTGGAAGAAACACT 26448 | ||| ||||| || || | ||||| ||||| |||||| | || ||||||||||| | Sbjct 60026 GTTCGGCACCGCAACGACGGCGCCGCCGGGGCTGAACCTGCTCCGGCTGGAAGAAACGTT 60085 Query 26449 GTCGGCGGCTCACCTGCGGCTGAGCAATACCTACATCGAGCACCTCAGCTGGCAGGACTG 26508 ||| || || ||||| || ||| || |||| | ||||| || ||||| ||| || Sbjct 60086 GTCCGCAGCCCACCTTCGCCTGGCGCGTATCTACGTGGAGCATCTGCCCTGGCTGGATTG 60145 Query 26509 CCTCCGGCGCTATGATCGAGAGCACACCCTCTTTTATATGGACCCGCCGTACTGGGAGAC 26568 | | |||||| || | |||||| ||||| || ||||||||||| |||||||| || Sbjct 60146 CGTGAAGCGCTACGACAGGCCGCACACGCTCTTCTACATGGACCCGCCCTACTGGGACAC 60205 Query 26569 GGAGGGCTATGGCGTGCCATTCGGCTTCGAGCAGTACCAGGAGATGGC 26616 || ||||| || ||| ||||||| ||||||||||| || |||||| Sbjct 60206 GGCCGGCTACGGAGTGGAATTCGGCATCGAGCAGTACGCGGCGATGGC 60253 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 122871527555238