Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_006820.1 Length=196280 Score E Sequences producing significant alignments: (Bits) Value seq1741 302 6e-77 seq2332 82.4 1e-10 seq224 82.4 1e-10 >seq1741 Length=9891 Score = 302 bits (334), Expect = 6e-77 Identities = 313/410 (76%), Gaps = 0/410 (0%) Strand=Plus/Plus Query 138468 GCTACAGTAGAAAATACTTTGTATGAAGATGGCGAACAATCAAATACTTTTAAAGCATTT 138527 || || ||||||||||| | | ||||||||| || |||| ||||| || ||| Sbjct 1 GCAACTGTAGAAAATACACTTTTTGAAGATGGTGATGGTGCAAACACTTTCCGTGCGTTT 60 Query 138528 GAACCTACTCAAGAAGAAGAAACCTATTCAATGGTTACTGCTAACCGTTACTGGTCGCAA 138587 | || ||||||| |||||||| ||||||||||| || || ||||||| |||||| ||| Sbjct 61 AACCCAACTCAAGCTGAAGAAACATATTCAATGGTAACCGCAAACCGTTTCTGGTCACAA 120 Query 138588 ATCTTTGGAATTGCTTTTAGTAATAAGCGTTGGCTTCACTTCTTTATGCTCTTTGTTCCC 138647 || ||||| | |||||| || || |||||| | ||||| |||||| | |||||||| Sbjct 121 ATTTTTGGTGTAGCTTTTTCAAACAAACGTTGGTTACACTTTTTTATGTTATTTGTTCCA 180 Query 138648 GTCATGGGTCTCTGGACTAGTAGTATTGGTATTATTGGTCTTGCTCTTAACCTACGAGCG 138707 || | ||||| |||| ||| ||||||| || | ||| | ||| | ||| |||| || Sbjct 181 GTAACTGGTCTTTGGATGAGTGCTATTGGTGTTGTAGGTTTAGCTTTAAACTTACGTGCT 240 Query 138708 TATGATTTCGTATCGCAAGAAATTCGTGCAGCAGAAGATCCTGAATTCGAGACCTTCTAC 138767 ||||||||||| || ||||||||||| || || ||||||||||| ||||| || ||||| Sbjct 241 TATGATTTCGTTTCACAAGAAATTCGCGCTGCGGAAGATCCTGAGTTCGAAACTTTCTAT 300 Query 138768 ACCAAGAACATTCTTCTGAATGAAGGTCTGCGTGCCTGGATGGCTCCTGTGGATCAACCT 138827 || || || |||||| | || |||||| | ||||| ||||||||| || ||||| ||| Sbjct 301 ACAAAAAATATTCTTTTAAACGAAGGTATTCGTGCTTGGATGGCTGCTCAAGATCAGCCT 360 Query 138828 CACGAAAACTTTGTTTTTCCTGAAGAAGTATTGCCAAGAGGCAACGCTCT 138877 || ||||| |||| || ||||| || || || ||| | || |||||||| Sbjct 361 CATGAAAAACTTGTATTCCCTGAGGAGGTTTTACCACGTGGAAACGCTCT 410 >seq2332 Length=7536 Score = 82.4 bits (90), Expect = 1e-10 Identities = 53/57 (93%), Gaps = 1/57 (2%) Strand=Plus/Minus Query 119469 GTCGCCAAGTGGTAAGGCAGCGGGTTTT-GGTCCCGCCATTCGTGGGTTCGAATCCT 119524 |||||||||||||||||| ||||||||| |||||||||||||| |||||||||||| Sbjct 7090 GTCGCCAAGTGGTAAGGCTGCGGGTTTTGGGTCCCGCCATTCGGAGGTTCGAATCCT 7034 >seq224 Length=33074 Score = 82.4 bits (90), Expect = 1e-10 Identities = 64/75 (85%), Gaps = 1/75 (1%) Strand=Plus/Minus Query 164732 CGGGGAATTAGCTCAGTTGGTAGTAGCGTTTGCTTTGCAAGCAAAATGTCAGGAGTTCGA 164791 ||||| ||||||||| |||||| |||| ||||||||||||| ||||||||||||||| Sbjct 10324 CGGGGCCTTAGCTCAGCTGGTAG-AGCGCCTGCTTTGCAAGCAGGATGTCAGGAGTTCGA 10266 Query 164792 GTCTCCTATTCTCCA 164806 ||||||| ||||| Sbjct 10265 ATCTCCTAGGCTCCA 10251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627905211049600