Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_006884.2 Length=178249 Score E Sequences producing significant alignments: (Bits) Value seq1741 188 8e-43 >seq1741 Length=9891 Score = 188 bits (208), Expect = 8e-43 Identities = 263/369 (71%), Gaps = 0/369 (0%) Strand=Plus/Plus Query 172464 ACTTTCAGAGCATTCGATCCTACACAGGAAGAAGAAACTTATAGTATGATTACTGCTAAC 172523 |||||| | || || | || || || | |||||||| ||| ||| | || || ||| Sbjct 46 ACTTTCCGTGCGTTTAACCCAACTCAAGCTGAAGAAACATATTCAATGGTAACCGCAAAC 105 Query 172524 AGATTCTGGTCACAGATATTTGGTATAGCATTTTCAAACAAAAGATTCTTACACTTCCTT 172583 | ||||||||||| || |||||| |||| |||||||||||| | | |||||||| || Sbjct 106 CGTTTCTGGTCACAAATTTTTGGTGTAGCTTTTTCAAACAAACGTTGGTTACACTTTTTT 165 Query 172584 ATGTTGTTCGTACCTGTCATGGGTATGTGGACATCATCTATAGGTATCGTAGGTCTTGCA 172643 ||||| || || || || | ||| | |||| |||| ||| | |||||| | || Sbjct 166 ATGTTATTTGTTCCAGTAACTGGTCTTTGGATGAGTGCTATTGGTGTTGTAGGTTTAGCT 225 Query 172644 CTTAACCTCAGAGCATACGACTTTGTATCTCAAGAGATAAGAGCAGCAGAAGACCCAGAG 172703 | ||| | | || || || || || || ||||| || | || || ||||| || ||| Sbjct 226 TTAAACTTACGTGCTTATGATTTCGTTTCACAAGAAATTCGCGCTGCGGAAGATCCTGAG 285 Query 172704 TTTGAAACCTTCTACACTAAGAACATTCTTCTTAATGAAGGTATGAGAGCATGGATGTCA 172763 || ||||| ||||| || || || |||||| | || |||||||| | || |||||| | Sbjct 286 TTCGAAACTTTCTATACAAAAAATATTCTTTTAAACGAAGGTATTCGTGCTTGGATGGCT 345 Query 172764 TCTGTCGATCAACCCCATGAGAACTTTGTGTTCCCAGAAGAAGTCTTGCCACGAGGCAAC 172823 || ||||| || ||||| || |||| ||||| || || || || ||||| || ||| Sbjct 346 GCTCAAGATCAGCCTCATGAAAAACTTGTATTCCCTGAGGAGGTTTTACCACGTGGAAAC 405 Query 172824 GCACTATAA 172832 || || ||| Sbjct 406 GCTCTTTAA 414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570211780248360