Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq7728 120 3e-22 seq12 109 5e-19 seq1162 105 6e-18 seq585 98.7 9e-16 seq1176 95.1 1e-14 seq73 95.1 1e-14 seq1233 87.8 2e-12 seq907 84.2 2e-11 >seq7728 Length=1087 Score = 120 bits (132), Expect = 3e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || |||| ||||| || | || | || |||||||| ||||||||||| || Sbjct 274 CCGCCTCGCAGGCGCAGAACCAGGTGCAATGTGGACTCCTTCTGAATGTTGTAGTCCGAA 215 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| |||||| ||||||||||| || |||| | |||||||| || || ||| Sbjct 214 AGCGTGCGGCCGTCCTCCAGCTGCTTGCCCGCAAAGATGAGGCGCTGCTGATCAGGGGGG 155 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| ||| || ||||| | | ||| | || ||| ||| ||| | Sbjct 154 ATCCCTTCCTTGTCCTGGATCTTTTGCTTCACATTCTCGATTGTGTCGCTGGGCTCAACA 95 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGACT 131238 || | ||| | ||| || || || || || || ||||| ||||||||| || Sbjct 94 TCTAGGGTGATGGTCTTGCCCGTCAGGGTCTTGACGAAGATCTGCATGGCT 44 >seq12 Length=84225 Score = 109 bits (120), Expect = 5e-19 Identities = 105/135 (78%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || |||| || ||||| || || | ||| ||||||||||| |||||||| || Sbjct 45 GCCGCCACGCAGGCGAAGCACCAAGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCAGC 104 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || ||||||| ||||| ||||||||||| || |||| | |||||||||||| ||||| Sbjct 105 CAGGGTGCGCCCATCCTCAAGCTGCTTGCCCGCAAAGATCAGACGCTGCTGGTCGGGAGG 164 Query 131127 GATTCCTTCTTTGTC 131141 || || || ||||| Sbjct 165 AATGCCCTCCTTGTC 179 >seq1162 Length=13745 Score = 105 bits (116), Expect = 6e-18 Identities = 114/150 (76%), Gaps = 1/150 (1%) Strand=Plus/Plus Query 130993 CACTTTCACCATGA-GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTG 131051 ||| || | ||| | ||| || |||| || ||||| | || | ||| ||||||||||| Sbjct 13590 CACCTTGATCATCATGCCGCCACGCAGGCGAAGCACCAGGTGGAGGGTGGACTCCTTTTG 13649 Query 131052 AATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACG 131111 |||||||| || || ||||||| ||||| ||||||||||| || |||| | ||| Sbjct 13650 GATGTTGTAGTCAGCCAGGGTGCGCCCATCCTCAAGCTGCTTGCCCGCAAAGATCAGACG 13709 Query 131112 CTGCTGGTCCGGAGGGATTCCTTCTTTGTC 131141 ||||||||| ||||| || || || ||||| Sbjct 13710 CTGCTGGTCGGGAGGAATGCCCTCCTTGTC 13739 >seq585 Length=20866 Score = 98.7 bits (108), Expect = 9e-16 Identities = 98/127 (77%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||||||||||| |||||||| | || | ||| |||||||| || |||||||| || Sbjct 670 GCCACCGCGCAGGCGCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGC 729 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || |||||| ||||| ||||||||||| || | || | ||||||||||| ||||| Sbjct 730 CAGGGTGCGGCCATCCTCCAGCTGCTTGCCCGCAAAAATCAGGCGCTGCTGGTCAGGAGG 789 Query 131127 GATTCCT 131133 |||||| Sbjct 790 AATTCCT 796 >seq1176 Length=13603 Score = 95.1 bits (104), Expect = 1e-14 Identities = 102/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| ||||||| |||||||| | || | ||| |||||||| || |||||||| || Sbjct 13253 GCCGCCGCGCAGGCGCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGC 13312 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || |||||| ||||| ||||||||||| || | || | ||||||||||| || || Sbjct 13313 CAGGGTGCGGCCATCCTCCAGCTGCTTGCCCGCAAAAATCAGGCGCTGCTGGTCAGGGGG 13372 Query 131127 GATTCCTTCTTTGTC 131141 ||| || || ||||| Sbjct 13373 GATGCCCTCCTTGTC 13387 Score = 91.5 bits (100), Expect = 1e-13 Identities = 101/135 (75%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || |||| |||||||| | || | ||| |||||||| || |||||||| || Sbjct 12494 GCCGCCACGCAGGCGCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGC 12553 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || |||||| ||||| ||||||||||| || | || | ||||||||||| ||||| Sbjct 12554 CAGGGTGCGGCCATCCTCCAGCTGCTTGCCCGCAAAAATCAGGCGCTGCTGGTCAGGAGG 12613 Query 131127 GATTCCTTCTTTGTC 131141 || || || ||||| Sbjct 12614 AATGCCCTCCTTGTC 12628 >seq73 Length=47289 Score = 95.1 bits (104), Expect = 1e-14 Identities = 102/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || |||| ||||| || | || | || ||||| || || ||| |||| ||| Sbjct 32399 GCCGCCACGCAGGCGCAGTACCAGGTGAAGCGTGGACTCTTTCTGGATGCTGTAGTCGGC 32458 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || |||||| ||||| ||||||||||| | | ||||||| ||||||||||| ||||| Sbjct 32459 CAGGGTGCGGCCATCCTCAAGCTGCTTGCCCGTGAAGATTAAGCGCTGCTGGTCGGGAGG 32518 Query 131127 GATTCCTTCTTTGTC 131141 ||| || || ||||| Sbjct 32519 GATGCCCTCCTTGTC 32533 >seq1233 Length=13172 Score = 87.8 bits (96), Expect = 2e-12 Identities = 91/118 (77%), Gaps = 1/118 (1%) Strand=Plus/Plus Query 131003 ATGA-GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAA 131061 |||| ||||||||||| |||||||| | || | || ||||| || || ||||||||| Sbjct 13055 ATGATGCCACCGCGCAGGCGCAGCACCAGGTGCAGCGTGGACTCTTTCTGGATGTTGTAA 13114 Query 131062 TCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGT 131119 ||| | |||||| |||||| ||||||||||| || |||| | |||||||||| Sbjct 13115 TCGGCAAGGGTGCGGCCGTCCTCCAGCTGCTTGCCCGCAAAGATCAGGCGCTGCTGGT 13172 >seq907 Length=16333 Score = 84.2 bits (92), Expect = 2e-11 Identities = 119/165 (72%), Gaps = 2/165 (1%) Strand=Plus/Plus Query 46147 TTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTTT 46206 || || |||||| || | || |||||| |||||||||| |||| || || || || Sbjct 11200 TTTGCGGAGCGTCTGATTGCGTTTGCGTGTGTGGAGGGCATCTTCTTCTCCGGGTCCTTC 11259 Query 46207 GCCGCCATCTTTTACATCAA-AACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGA 46265 | ||||||| | |||| || | || | ||||||||||||| || || ||||| Sbjct 11260 TGCTCCATCTTCTGGCTCAAGAAGCGCGGAC-TCATGCCCGGCCTCACTTTCTCAAACGA 11318 Query 46266 GCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCT 46310 ||| || || |||||||||||||| || |||||||| || || Sbjct 11319 GCTCATCAGTCGGGACGAGGGCCTGCACACAGACTTTGCCTGCCT 11363 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471965604620160