Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_008296.2 Length=177300 Score E Sequences producing significant alignments: (Bits) Value seq1741 279 6e-70 >seq1741 Length=9891 Score = 279 bits (308), Expect = 6e-70 Identities = 308/408 (75%), Gaps = 2/408 (0%) Strand=Plus/Plus Query 167906 ACAGTAGAGAATACTCTGTATGAAGATGGTGAGCAAGCAAACACTTTCAAAGCATTTGAT 167965 || ||||| ||||| || | |||||||||||| |||||||||||| || ||| | Sbjct 4 ACTGTAGAAAATACACTTTTTGAAGATGGTGATGGTGCAAACACTTTCCGTGCGTTTAAC 63 Query 167966 ACGACTCAGGAAGAGGAAACTTATTCCATGGTCACTGCTAACCGATTCTGGTCTCAAATT 168025 | ||||| | || ||||| ||||| ||||| || || ||||| |||||||| |||||| Sbjct 64 CCAACTCAAGCTGAAGAAACATATTCAATGGTAACCGCAAACCGTTTCTGGTCACAAATT 123 Query 168026 TTTGGTATTGCTTTCAGCAATAAGCGTTGGTTGCACTTCTTTATGCTTTTCGTTCCTGTC 168085 |||||| | ||||| || || |||||||| ||||| |||||| | || ||||| || Sbjct 124 TTTGGTGTAGCTTTTTCAAACAAACGTTGGTTACACTTTTTTATGTTATTTGTTCCAGTA 183 Query 168086 ATGGGACTTTGGACAAGTTCTATTGGTATCATCGGTCTCGCACTTAATCTT-CGTGCTTA 168144 | || ||||||| ||| |||||||| | | ||| | || |||| ||| |||||||| Sbjct 184 ACTGGTCTTTGGATGAGTGCTATTGGTGTTGTAGGTTTAGC-TTTAAACTTACGTGCTTA 242 Query 168145 TGACTTTGTGTCTCAGGAAGTTAGAGCAGCAGAGGATCCAGAGTTTGAAACTTTCTATAC 168204 ||| || || || || ||| || | || || || ||||| ||||| |||||||||||||| Sbjct 243 TGATTTCGTTTCACAAGAAATTCGCGCTGCGGAAGATCCTGAGTTCGAAACTTTCTATAC 302 Query 168205 GAAAAACATCCTCCTCAATGAAGGACTCCGTGCCTGGATGGCTCCAGTAGACCAACCACA 168264 ||||| || || | || ||||| | ||||| ||||||||| | ||| || || || Sbjct 303 AAAAAATATTCTTTTAAACGAAGGTATTCGTGCTTGGATGGCTGCTCAAGATCAGCCTCA 362 Query 168265 TGAAAACTTTGTATTCCCAGAAGAAGTATTGCCAAGAGGCAACGCTCT 168312 |||||| |||||||||| || || || || ||| | || |||||||| Sbjct 363 TGAAAAACTTGTATTCCCTGAGGAGGTTTTACCACGTGGAAACGCTCT 410 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 567175283890400