Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq7728 104 2e-17 seq12 95.1 1e-14 seq1162 93.3 4e-14 seq1176 86.0 5e-12 >seq7728 Length=1087 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | || || || || |||| || || || || ||| | Sbjct 48 ATGCAGATCTTCGTCAAGACCCTGACGGGCAAGACCATCACCCTAGATGTTGAGCCCAGC 107 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || | || ||||| || || |||||||| || || || || ||||| Sbjct 108 GACACAATCGAGAATGTGAAGCAAAAGATCCAGGACAAGGAAGGGATCCCCCCTGATCAG 167 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || ||||| ||||| ||| | ||||| |||||| | || || |||||| Sbjct 168 CAGCGCCTCATCTTTGCGGGCAAGCAGCTGGAGGACGGCCGCACGCTTTCGGACTACAAC 227 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 ||||| || || ||||| | || | ||| |||| |||| || || Sbjct 228 ATTCAGAAGGAGTCCACATTGCACCTGGTTCTGCGCCTGCGAGGCGG 274 >seq12 Length=84225 Score = 95.1 bits (104), Expect = 1e-14 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 22306 ATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAG 22365 || || ||||||||||| ||||| ||||| || || ||||| || ||||| ||||| ||| Sbjct 185 ATGCAGGACAAGGAGGGCATTCCTCCCGACCAGCAGCGTCTGATCTTTGCGGGCAAGCAG 126 Query 22366 TTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACATTTA 22425 | |||||| |||||| | | || |||||||| ||||| || |||||| | || || Sbjct 125 CTTGAGGATGGGCGCACCCTGGCTGACTACAACATCCAAAAGGAGTCCACCCTCCACTTG 66 Query 22426 GTTTTGCGATTGCGCGGAGG 22445 || | || |||| || || Sbjct 65 GTGCTTCGCCTGCGTGGCGG 46 >seq1162 Length=13745 Score = 93.3 bits (102), Expect = 4e-14 Identities = 87/111 (78%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 22306 ATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAG 22365 || || ||||||||||| ||||| ||||| || || ||||| || ||||| ||||| ||| Sbjct 13745 ATGCAGGACAAGGAGGGCATTCCTCCCGACCAGCAGCGTCTGATCTTTGCGGGCAAGCAG 13686 Query 22366 TTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416 | |||||| |||||| | | || |||||||| ||||| || |||||| Sbjct 13685 CTTGAGGATGGGCGCACCCTGGCTGACTACAACATCCAAAAGGAGTCCACC 13635 >seq1176 Length=13603 Score = 86.0 bits (94), Expect = 5e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 22309 CAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTA 22368 || ||||||||||| ||||| || || || || || || || ||||| ||||| ||| | Sbjct 12631 CAGGACAAGGAGGGCATTCCTCCTGACCAGCAGCGCCTGATTTTTGCGGGCAAGCAGCTG 12572 Query 22369 GAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACATTTAGTT 22428 |||||| ||||||| | | || |||||||| || || || |||||| | || | || Sbjct 12571 GAGGATGGCCGCACCCTGGCTGACTACAACATCCAGAAGGAGTCCACCCTCCACCTGGTG 12512 Query 22429 TTGCGATTGCGCGGAGG 22445 |||| |||| || || Sbjct 12511 CTGCGCCTGCGTGGCGG 12495 Score = 86.0 bits (94), Expect = 5e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 22309 CAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTA 22368 || ||||||||||| || || || || || || || || || ||||| ||||| ||| | Sbjct 13390 CAGGACAAGGAGGGCATCCCCCCTGACCAGCAGCGCCTGATTTTTGCGGGCAAGCAGCTG 13331 Query 22369 GAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACATTTAGTT 22428 |||||| ||||||| | | || |||||||| || || || |||||| | || | || Sbjct 13330 GAGGATGGCCGCACCCTGGCTGACTACAACATCCAGAAGGAGTCCACCCTCCACCTGGTG 13271 Query 22429 TTGCGATTGCGCGGAGG 22445 |||| ||||||| || Sbjct 13270 CTGCGCCTGCGCGGCGG 13254 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419687081635435