Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_009016.1 Length=38197 Score E Sequences producing significant alignments: (Bits) Value seq1 352 7e-93 >seq1 Length=201307 Score = 352 bits (390), Expect = 7e-93 Identities = 498/698 (71%), Gaps = 9/698 (1%) Strand=Plus/Plus Query 21029 TGGATGGGTGGCAAGCGCCGCCTGGCTAAACACATCCTGCCAGAGTTCCCAGAGCACGAG 21088 ||| |||||||||||||||||||||| | | || || || | || || |||| Sbjct 59679 TGGTTGGGTGGCAAGCGCCGCCTGGCCGACAAGATTCTTCCCCATTTTCCTAAGCATTCC 59738 Query 21089 TGCTATGTGGAGCCGTTCTGTGGGGCCGCTGCCCTGTTTTTT---ATGAAGATGCCGACC 21145 ||||| || ||||| ||| || | || || ||| | || | | | |||| || Sbjct 59739 TGCTACGTCGAGCCTTTCGCGGGCGGGGCGGCACTGCTGTTCGCCAGGCCGGAGCCGGCC 59798 Query 21146 AAGGTTGAAGTCATCAACGACGTGAACAGCGACCTGGTTAACCTGTACCGCGTGGTGCAG 21205 ||||| || || | ||||| | ||| |||||||||| ||||| ||||||||||||||| Sbjct 59799 AAGGTCGAGGTGCTGAACGATATCAACGGCGACCTGGTCAACCTCTACCGCGTGGTGCAG 59858 Query 21206 CATCACCTCGAGGAGTTCGTCCGCCAGTTCAAATGGGCGCTTATCAGCCGCGAGATGTTC 21265 || ||||| || |||||||| ||||||||||| |||||||| | |||||| |||||||| Sbjct 59859 CACCACCTGGAAGAGTTCGTGCGCCAGTTCAAGTGGGCGCTGACCAGCCGGCAGATGTTC 59918 Query 21266 AAGTGGCTGGACGATACGCCCGTCGAGACCCTGACCGATATTCAGCGTGCTGCCCGGTTC 21325 ||||||| | | || |||| |||||| ||||| ||||||||||| || ||||| ||| Sbjct 59919 AAGTGGCAGAAAGAAACGCGGCCCGAGACGCTGACTGATATTCAGCGGGCGGCCCGCTTC 59978 Query 21326 TATTACCTGCAGCAGATGGGCTTCGGCGCCAAGATTACCGGCCGCACCTTTGGCACGGCC 21385 || |||||| ||||| ||||| ||| |||| | || | || || ||||| || Sbjct 59979 TACTACCTGATGCAGAACTGCTTCAGCGGCAAGCTGGAGGGTCAGACGTTCGGCACCGCA 60038 Query 21386 ACCACTACGCCGCCAAAACTGAACCTGCTGCGCCTCGAGGAGACGCTAAGCCAGGCGCAC 21445 || || ||||||| ||||||||||| || || || || ||| | | || ||| Sbjct 60039 ACGACGGCGCCGCCGGGGCTGAACCTGCTCCGGCTGGAAGAAACGTTGTCCGCAGCCCAC 60098 Query 21446 CTACGCCTGAGCCGTGTTTACGTTGAGCACCTGGACTGGCAGGCGTGCATGGAAAAGTAC 21505 || |||||| ||| | ||||| ||||| ||| ||||| || ||| || | ||| Sbjct 60099 CTTCGCCTGGCGCGTATCTACGTGGAGCATCTGCCCTGGCTGGATTGCGTGAAGCGCTAC 60158 Query 21506 GACCGACCGCACACCCTGTTTTACCTCGACCCGCCGTACTGGCAGACCGAGGGCTACGGT 21565 ||| | |||||||| || || ||| | |||||||| |||||| | || | |||||||| Sbjct 60159 GACAGGCCGCACACGCTCTTCTACATGGACCCGCCCTACTGGGACACGGCCGGCTACGGA 60218 Query 21566 GTCGACTTCCCCTTCGAGCAATATGAGCGCATGGCTGA---GATGGCCAGGACGGTGAAG 21622 || || ||| | ||||||| || | | |||||||| ||| || || |||| Sbjct 60219 GTGGAATTCGGCATCGAGCAGTACGCGGCGATGGCTGATTCCATG---CGGTCGATGAAA 60275 Query 21623 GGTAAGGTGGTGATCAGCATCAACGACCACCCGGATATCCGAAAGGCGTTCGCCGGCTTC 21682 ||| | | || ||||| |||| ||||| ||| | || || | || ||||||||||| Sbjct 60276 GGTCGCGCGCTGGTCAGCGTCAATGACCATCCGAAGATGCGCGAAGCCTTCGCCGGCTTT 60335 Query 21683 CGGATGCAGGAAGTTAGCCTGCGCCATACCGTTGGCGG 21720 ||||||| | | | ||| | ||||| ||||| Sbjct 60336 TCCATGCAGGTGCTGGACATCCGCTACACCGTCGGCGG 60373 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 122097201114042