Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_009604.1 Length=47382 Score E Sequences producing significant alignments: (Bits) Value seq75 141 3e-29 >seq75 Length=46716 Score = 141 bits (156), Expect = 3e-29 Identities = 591/906 (65%), Gaps = 60/906 (7%) Strand=Plus/Minus Query 6179 TTATACGCCGATCAT-CTGCGCGACGGCGAACGGACGGAAGATCACTGCGCCCCAGGTGC 6237 ||| ||||||||||| ||| |||| ||| | |||| ||| || |||||||| |||| Sbjct 20110 TTACACGCCGATCATGCTG-GCGATGGCCATCGGAACCTTGATGACGGCGCCCCACGTGC 20052 Query 6238 CGGCCGACTTCTTCTGACGGAAGTACGACGAATAGCGCTCGATGGAGTGCGCACGCATCT 6297 | |||||||||||| |||| || | | ||| |||||| |||||| ||||||| Sbjct 20051 CCTGCGACTTCTTCTGCTTGAAGCTGGAGGTGTCGCGGACGATGGCGTGCGCGCGCATCT 19992 Query 6298 TTTCCGTAAAGCCGCAGGTCGCCGTGTCCTTGCCTTCGA-CG----CGCGGTGCCCAGAG 6352 | || || ||| || ||| || || || |||||||| || |||| || || Sbjct 19991 TCTCGGTGAAGGCGGCGGTTCCCACGTTCTGGCCTTCGATCGAGTCCGCGATG-----AG 19937 Query 6353 CTGCACGAGACGGCCCGACGCCGTGTCGTATTCCGGAATCGTCACGAATTCCAGCTTCGG 6412 |||||| || | ||||| ||||| |||| | | ||| ||| ||| || || Sbjct 19936 CTGCACCAGCTGACCCGAGCCCGTGGCGTACTGCACGGCGGTCTCGACGGTCAGGTTGGG 19877 Query 6413 GAAAATTTCCTTCAGCTTGGCAGCGGCCGACAGACCGT--ACTGGTTCGTCTTGCTCAGA 6470 ||| | | |||| || | || | || ||| | ||||||||||||| |||| Sbjct 19876 GAAGTTCTTGGCCAGCATGTC-GCTGACGTT-GACGTTGAACTGGTTCGTCTTCGTCAGG 19819 Query 6471 TCGGACATCGCCGTCGG-CGGCAGGCCCATATGCAG---GACAGCTTCTTGCGTGATGAT 6526 | | || ||| |||| || || || || | ||| | | || | |||||| | Sbjct 19818 TTG-ACTTCGATCTCGGGCGACATGCACAGCTTCAGCTTGTC-GCGGC--GCGTGACCAG 19763 Query 6527 GCCCTGCGACTGCGTTTGCAGCACCTGGA---ACAGCGTGACGACTTCGTTCACGACCGC 6583 ||| ||| |||||| || || |||| | | | |||||| |||| |||| | Sbjct 19762 GCCACGCGTCTGCGT---CACCAGCTGGCCGTAGATCTTGACGATGTCGTCATAGACCCC 19706 Query 6584 TTCGACAGCCGG---CGACC-----------CCGACCACGGCGTGGTCGCAGTGATCGGT 6629 | | | || ||||| ||| | || || | ||| || || ||| Sbjct 19705 CTGGCCGTCCTTGCCCGACCAGAGCGTCACGCCGCCGAC--CGAGATCGGAGCGACCGGC 19648 Query 6630 GCAGACAGCGACGGATCGTTGATCAGGCCGTAGTTTTCCAGGCCTGCCACGCCGAACAGA 6689 || ||||| ||| ||||| | |||||| ||||| | |||||| || | |||||| | Sbjct 19647 GCCGACAGGTTCGGGTCGTTCAGCAGGCCATAGTTCTGCAGGCCGGCGATGCCGAAGAAG 19588 Query 6690 TACGAGCCGTTCAGGAACTTCGCGAGGCCGAGGGCCGACGAATAGTTCAGTTCGCTCGCC 6749 || | || | ||||||| || | | || || | ||||||||| |||| Sbjct 19587 TAGCTGTTGTCCTGGAACTTGTTCAGCACCAACGCGGATGCGATGTTCAGTTCCGACGCC 19528 Query 6750 AGGTCGA-CGCGGCCCGCGCCGGCCATTTCCAGCTCGCGCTCGCCCCATCGCGTCCACGT 6808 || || | ||| | || ||||| |||||||||||||| |||||| |||| || Sbjct 19527 CAGTTGATCTTCGCCTGA-CCTGCCATGTCCAGCTCGCGCTCACCCCATTCCGTCATGGT 19469 Query 6809 CTGGAAGAAATACGACTGACGTTGCGGGTAGTTGATGTTCGTGCCGCTGTCGCCGTCGGA 6868 ||| || |||||||| || |||||| ||||| |||||| |||| | ||||| | Sbjct 19468 TTGGTAGTGGTACGACTGGCGCTGCGGGAAGTTGGTGTTCGCGCCGGCGCGGCCGTTGTT 19409 Query 6869 CGAGTAGTCGCCATACGTGGCGAC-CGTC-GTCGTCGGCTCGGCGGTGATGAATGCCGCG 6926 | ||||||| || | |||| | || ||| | || | ||| | ||| Sbjct 19408 GTTGAAGTCGCCGTA--GGACGACACTTCACCCGTGGATTCCACCACCGGGAAGGTTGCG 19351 Query 6927 ACCAGCGTCGTCCAGTCGCCTTTCTTCGATTCGCCGACGAGCTCGGCGGCCTTCATCGGA 6986 |||||| ||||||||||| ||||||| |||||| | || | ||||| ||| ||| || Sbjct 19350 GTCAGCGTGGTCCAGTCGCCCTTCTTCGCTTCGCCCAGGATCACGGCGCCCTGCATGGGC 19291 Query 6987 G-CGACGAGGATGTCGATCACC--GACGGG-TCGACGTAGGTCGTCAGGTAGTTCGGGAT 7042 | || | || | || |||| |||| ||||| ||| || || |||| |||| || Sbjct 19290 GTCGTC-AGAA---CGCGCACCAGTTCGGGATCGACATAGTTCAGCATGTAGCTCGGAAT 19235 Query 7043 ACCCGA 7048 ||||| Sbjct 19234 GCCCGA 19229 Score = 107 bits (118), Expect = 6e-19 Identities = 351/534 (66%), Gaps = 21/534 (4%) Strand=Plus/Minus Query 11317 GCACGTAGTCGTACCAGACGCGAATCTCGCCTTC-GCTCGATGCGTTCAAGCCGGTCGGC 11375 ||| || |||||| ||||||| || || || || ||| | ||||||| |||| | ||| Sbjct 15515 GCATGTCGTCGTAGAAGACGCGGATTTCACCGTCCGCT-GTGGCGTTCAGGCCGCTGGGC 15457 Query 11376 GTGATACCGAGCAGCTTGATCAGCGGAATGTGCGAGACGGCGCTCATCTGCTCCTGGGCC 11435 | || || | |||||||| |||||| ||| || ||| | || |||||| ||| | Sbjct 15456 GAAATGCCCATCAGCTTGACCAGCGGGATGCCGGACACGACAGACAATTGCTCCAGGGAC 15397 Query 11436 TGGGCCTGCAGTGCGTCGAGCCCGGATAGCGGCGTGTT---GAACTGGAAGAATTCTTCC 11492 ||| ||| || || || || ||||| |||||| || |||| ||||| || || Sbjct 15396 TGGTTCTGTAGCGCATCCAGGCCGGACAGCGGCACATTCTCGAACCGGAAG---TCCTCG 15340 Query 11493 GTCGCCTTGTCGA--GGAAAAGAATGTTCCGGTTGTCGCGATAGCGGTTGATCAGCTCGG 11550 || ||||||||| | | | | |||||| || |||||||| ||| ||| Sbjct 15339 CTCTCCTTGTCGATCGCCCACGC--GCCGCGGTTGGTCCGCATGCGGTTGAACAGGTCGA 15282 Query 11551 CGCGCATCGACAA-ATCGACGTTCG---CGCCGGGCATCAACGCCTGCGCGAGGTCCATC 11606 |||| ||| || |||| | || ||||| || | || || | || | | Sbjct 15281 CGCGGC-CGAAAACATCGGTGCCCGGATCGCCGCCCAGGATCGAA---GCCATGTTCGTG 15226 Query 11607 AAGATGCCCGACACGCTGAACTGCTTGACGATGTCCGACACCGACTGGCGTGTGCGCAGC 11666 || || ||| ||| | || | || || ||| | |||||| || |||| Sbjct 15225 CTGAACAGCGGGACGGAGAAGCCATCGATCAGGTTCGCCACGGCCTGGCGCGTCTTCAGC 15166 Query 11667 CAGTTGTCGATGTACGGCATCGCGAGCTGCGTCATGCTGATGCCGGCGAACGAATACGTC 11726 ||||||| || |||||| ||||| ||||||||||| |||||| |||| |||| Sbjct 15165 CAGTTGTTGACGTACGGGATCGCCAGCTGCGTCATCGACATGCCGCCGAAGTTGTACGAA 15106 Query 11727 GGCTTGAGCATGTCGCCGACCGGGCGCGATACGATCGTGTGCAGGCGCGTCGCGTGGACT 11786 | ||| |||| ||| ||| |||||| ||||| | ||||||| | ||| || Sbjct 15105 GCCTTCAGCAGGTCCGGCACCTCGCGCGACACGATGCTCAGCAGGCGGCTGCTGTGCACC 15046 Query 11787 TCGGTGCCGATCATCCACCACGTCGAGGGTTTGTAGAAGT-CGTCCGCAACGGG 11839 | | || | || |||||| | ||| |||||||| | || ||||| |||| Sbjct 15045 TGGCGCCCCAGCACGAACCACGAGGTGGGCTTGTAGAAATCCGCCCGCATCGGG 14992 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 151486409223072