Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq1788 374 2e-98 seq630 114 3e-20 seq6575 109 1e-18 seq234 105 1e-17 seq3990 96.9 8e-15 seq907 86.0 1e-11 >seq1788 Length=9675 Score = 374 bits (414), Expect = 2e-98 Identities = 579/827 (70%), Gaps = 0/827 (0%) Strand=Plus/Plus Query 333165 TTCCACTGAACCTCGTACTCGTAAGATTTTTTCAGCTTGCGGCGACCAAGAATCTTGTCA 333224 |||||||| |||||||||||||| ||| |||||||||| || || | ||| || Sbjct 8 TTCCACTGCACCTCGTACTCGTAGCCGCGCTTCTGCTTGCGGCGGCCCAGCAGCTTCTCC 67 Query 333225 AGAATTTTCTTCACTCCGTCAACGACTTTAGTGTCATACATCTTCTTTAGTTCTTCTTCG 333284 | | |||||| ||||| || || || || | ||||||||| || || || Sbjct 68 ACCACGCGCTTCACGCCGTCCACCACCTTGACCTCGTTCATCTTCTTCTCCTCCTCCTCC 127 Query 333285 TTGTTCTTCCTAGAAACGACGTCAAGGGTCTCTTTGTCTTCACCGGAGGCATAACGCCAT 333344 ||| ||| | || || ||| |||| ||| ||| || |||| ||| |||||||| Sbjct 128 TTGAGCTTGCGCGACACCTTGTCCAGGGACTCGCGGTCCTCGCCGGTGGCGTAACGCCAC 187 Query 333345 TGGATATACTGGTTGGGTGTCATGTCAAGATGATCCTCGATGTGGTGGAAAGCATGCTGT 333404 ||||| ||||||||||| |||||||| || || | ||| ||||||||||| || ||||| Sbjct 188 TGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATGTGGTGGAAGGCGTGCTGA 247 Query 333405 GCCACGTAAGCAAGACGCATATTTGGATGCTTCCAAACACTTCCGTTGGTGGCTTCCATT 333464 |||||||| || | |||| || || |||||||| || || ||| |||| Sbjct 248 GCCACGTAGGCCACGCGCAGGTTGGGGTGCTTCCACACCAGGCCAGACTCGGCCTCCAGC 307 Query 333465 TGCCCCGTGAGCACCTTAATGAGAGTGCTTTTTCCCGCACCATTTTCGCCTACCACACCA 333524 | || || |||| ||| ||||| ||| || || ||||| || ||| | ||| | Sbjct 308 TCGCCGGTCAGCAGCTTGATGAGGGTGGACTTGCCGGCACCGTTGGGGCCCAGCACGGCC 367 Query 333525 ATCCTGGAGTTCAGCGATACCTGGGCATTCACGTTGTCAAAGATTAGTTTTTCCGTACCC 333584 | | ||||| ||||| ||||| || || | || | ||| | | || | Sbjct 368 ACGCGCGAGTTGAGCGACACCTGCAGGTTGACCTCGTTCAGGATGCGGGTCTCGGCGGTG 427 Query 333585 GGATACTTGAACCCCACACCGCGTAGCTTCATGATGGCACGGTCCTTCGAAGTGATACCC 333644 || |||||||| || ||||| | ||| | |||||| |||||||| || |||| ||| Sbjct 428 GGGTACTTGAAGTTGACGCCGCGCATCTTGAGGATGGCGCGGTCCTTGGAGGTGACGCCC 487 Query 333645 TCGAGGAACCCGGGCTCGGGGAACTTCCACGTGGTCTTCGTCTCGGTAAGGGCGTAGTAA 333704 |||||||| ||||||||||| | | |||| |||| | | |||| ||| |||||| Sbjct 488 TCGAGGAAGCCGGGCTCGGGCAGCACCCACTTGGTGGTGGCGTCGGCCAGGTTGTAGTAG 547 Query 333705 CTCGCTGATTCGGGACGCTTCTTCACGAACTCGGACAGATTTCCCTTGTACTTCTTCAGC 333764 || | ||||| |||| || ||| |||| |||||| || ||| ||||||||||||| Sbjct 548 GCAGCGGCCTCGGGGCGCTGCTCCACAAACTTGGACAGGTTGCCCAGGTACTTCTTCAGC 607 Query 333765 TTTAGGTTAGGTTCGTAATGGATAATAGAGGTGCAAACAGCGTCGAGGAACCCGGAGTCG 333824 || | ||| ||||| ||||| || |||||| || ||||| ||||| || |||||| Sbjct 608 TTGAAGTTGTCCTCGTAGTGGATGATGCTGGTGCACACGGCGTCCAGGAAGCCAGAGTCG 667 Query 333825 TGTGACACAATCACGCACGAAACGTCCTTAAGGTTGATCAGGTATTCAATCAGCCACCTC 333884 || ||||| | ||||| | || |||| ||| || |||||| || ||||||||| | Sbjct 668 TGCGACACCACCACGCTGGTCACCCCCTTGAGGCCGACCAGGTAGTCGATCAGCCACTTG 727 Query 333885 ACGTTAGACACAGAAAGATGGTTGGTCGGCTCGTCAAGAAGTAGTAGCTTTGCGTTCAGG 333944 ||||| | ||| || |||||||| ||||| || || || | | | ||||||| Sbjct 728 ACGTTGGTCACGTCCAGGTGGTTGGTGGGCTCATCCAGCAGCATGATGTCGGCGTTCATC 787 Query 333945 AGCATTGCACGTGCAAGAGCGAGTTTCATTTTCCACCCTCCTGAAAG 333991 ||||| || || || || || || ||||| ||||| || || || || Sbjct 788 AGCATGGCGCGCGCCAGGGCCAGCTTCATCTTCCAGCCACCAGACAG 834 Score = 168 bits (186), Expect = 1e-36 Identities = 197/266 (74%), Gaps = 0/266 (0%) Strand=Plus/Plus Query 334620 GCGACCTTCCGAGCTTCGGGGTTAGACATACCTTCGGCAGCGGACTTAATCTTATCAACC 334679 || |||| || || |||||||| ||||| || || ||| |||| | || | | Sbjct 1649 GCCACCTCGCGGGCCTCGGGGTTGGACATGCCCTCCATCGCGTACTTGACGTTGGGCAGC 1708 Query 334680 AGGAGGTAGGCGAATTTAGCGGCGTCGGAAGGGTCGTCCACAAGTTTCGCCATGTTCCGG 334739 ||| | | || || |||||||| ||||||||||| || || |||||||| ||| Sbjct 1709 AGGGTGGCCACAAAGTTGGCGGCGTCCACCGGGTCGTCCACCAGCTTGGCCATGTTGCGG 1768 Query 334740 ATGATAACACACGTCTTACGCCGAACGGGGGTGGTGCGATCGGCAAGCCCGCGGACGAGT 334799 ||||| || || | ||| || || | |||||||||||| |||| || ||||||||||| Sbjct 1769 ATGATGACGCAGGCCTTGCGGCGGATGGGGGTGGTGCGGTCGGTCAGGCCGCGGACGAGC 1828 Query 334800 AGCGGGGTCAGGATAGACAGGGTCTTCGCGTCGACCGACTGGACGAACGTGGTCGCAGAT 334859 || || |||||| |||||||| |||||| || ||||| |||||||||||||| || Sbjct 1829 AGGGGCACCAGGATGGACAGGGTGCGCGCGTCCACAGACTGCACGAACGTGGTCGCCGAC 1888 Query 334860 AGGTTGTGGACACACTCGGGGACGTC 334885 || |||||||| || ||||| || || Sbjct 1889 AGCTTGTGGACGCAGTCGGGCACCTC 1914 >seq630 Length=20033 Score = 114 bits (126), Expect = 3e-20 Identities = 99/123 (80%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 333320 GTCTTCACCGGAGGCATAACGCCATTGGATATACTGGTTGGGTGTCATGTCAAGATGATC 333379 ||| |||||| ||| |||||||| ||||| ||||||||||| |||||||| || || Sbjct 10549 GTCCTCACCGCTGGCGTAACGCCACTGGATGTACTGGTTGGGAGTCATGTCCAGGTGGCT 10608 Query 333380 CTCGATGTGGTGGAAAGCATGCTGTGCCACGTAAGCAAGACGCATATTTGGATGCTTCCA 333439 ||| ||||||||||| || ||||| |||||||| || | ||||| || || |||||||| Sbjct 10609 CTCAATGTGGTGGAAGGCGTGCTGCGCCACGTAGGCCACACGCAGGTTGGGGTGCTTCCA 10668 Query 333440 AAC 333442 || Sbjct 10669 CAC 10671 Score = 100 bits (110), Expect = 6e-16 Identities = 222/330 (67%), Gaps = 5/330 (2%) Strand=Plus/Plus Query 334725 TTCGCCATGTTCCGGATGATAACACACGTCTTACGCCGAACGGGGGTGGTGCGATCGGCA 334784 || |||||||| |||||||| || || | |||||| || | |||||||||||| || | Sbjct 13634 TTGGCCATGTTGCGGATGATGACGCATGCCTTACGGCGGATGGGGGTGGTGCGGTCTGTG 13693 Query 334785 AGCCCGCGGACGAGTAGCGGGGTCAGGATAGACAGGGTCTTCGCGTCGACCGACTGGACG 334844 || ||||| || || || || |||||| |||||||| || || || ||| || Sbjct 13694 AGGCCGCGCACCAGCAGGGGCACCAGGATGGACAGGGTGCGTGCATCCACGCTCTGAACA 13753 Query 334845 AACGTGGTCGCAGATAGGTTGTGGACACACTCGGGGACGTC-CTGAGGAGAACCAATGCT 334903 || ||||| || || ||||| || || ||||| || || ||| || | || |||| Sbjct 13754 AAGGTGGTGGCGCTCAGCTTGTGCACGCAGTCGGGCACCTCGCTG-GGGGCGCCGATGCA 13812 Query 334904 CTTCACAAGATGGGGAATGAAGGGTTCGATGTCTTTGTTATCAAT---TTGACAACACGC 334960 | || ||||| | ||||| || ||||| ||| |||| ||| ||| Sbjct 13813 GCGGATCAGGTGGGGCACAAAGGGCTCAATGTCGCGGTTGCCAATGGCGGCACAGCACTT 13872 Query 334961 GATAAGAGCCTTCGTGGCACTATCCTTTACCACTTGCTTCAGGTCAAGCATACAATCTGT 335020 | | || || || || || | || |||| ||||| | ||| || | || Sbjct 13873 GGTGAGTGCGTTGGTCGCGGCAGAGCGCACGGTGGGCTTGAGGTCCACCATGCAGTTGGT 13932 Query 335021 CACCACCGGTACGATTTCGGGAAGGTAGAC 335050 |||||| || || ||||||||||||||||| Sbjct 13933 CACCACGGGCACAATTTCGGGAAGGTAGAC 13962 >seq6575 Length=1550 Score = 109 bits (120), Expect = 1e-18 Identities = 233/344 (68%), Gaps = 7/344 (2%) Strand=Plus/Plus Query 332849 GGCCATTGCTCCGAGACTCTCACGGTCAACGAAGTTGGTCGGTTCGTCCAAAACGATCAC 332908 |||||| || || || ||| ||||| | | ||||||| || ||||||| || | | Sbjct 982 GGCCATGGCGCCCAGGGACTCGCGGTCCAGGTAGTTGGTGGGCTCGTCCAGCACCAGGAT 1041 Query 332909 GTGGGGTTGTTGCCATAGAGCAGCGCCGATAACCAATTTCAGCTTTTGCCCGCCAGATAG 332968 |||||| || ||||| | || || || | |||| |||| ||| || || ||||| || Sbjct 1042 GTGGGGCTGCTGCCACATGGCGGCACCCAGCACCAGCTTCACCTTCTGGCCACCAGACAG 1101 Query 332969 ACCACGAATGCGAGAATGAGTTGTAAATTCAGGGTCGAGACCAACATTTGCCATATGTTC 333028 || || || | || || || | || || | | || || | || ||| || Sbjct 1102 GCCGCGGATCTGGGAGTGGGTGGCGAACTCGGCGGGCAGGCCCAGGTTGCCCAGCATCTC 1161 Query 333029 TTCCACGTTCTTTGCGGTCAGTGGCTTG---AACATACCGTTTGCGACGGCTTCTTTGGT 333085 ||||||||||| |||||||| |||||| | || ||| ||| | || || || | Sbjct 1162 CTCCACGTTCTTGGCGGTCAGGGGCTTGCCCAGCAGGCCGGCGGCGGCCGCCTCCTTCAT 1221 Query 333086 GTCAATGTCGTTCAGAAGTTTTCCGAAA--CCATACTCCTCGAGGCGTTCGCGAGATATC 333143 ||| |||||| | || | | ||| | || |||| ||||||||| || ||||| | | | Sbjct 1222 GTCGATGTCGGTGAGCA-TCTTCTGGAAGCCCAT-CTCCTCGAGCCGGTCGCGGGTCAGC 1279 Query 333144 CATTGGGTAGTCTCATCGTTTTTCCACTGAACCTCGTACTCGTA 333187 || || | | ||| |||||||| |||||||||||||| Sbjct 1280 CAGGAGGCCTCCCCCTCGCCCTTCCACTGCACCTCGTACTCGTA 1323 >seq234 Length=32518 Score = 105 bits (116), Expect = 1e-17 Identities = 299/455 (66%), Gaps = 6/455 (1%) Strand=Plus/Plus Query 306442 TCCTTGCGAGTCTCATTTGATTCTACAATTGCTCCGATGATATCTTGAGGCACCCCCTCG 306501 |||||||| ||| ||| || || || || || || | || |||||||| || || Sbjct 19683 TCCTTGCGCGTCGTATTGGACTCGACGATGGCATGAATCAAATTCTGAGGCACATCC-CG 19741 Query 306502 A-AATTAGCCAGCAATTGCTTCGTATCCTTTGGAAAGCAATAAGCTCCGTAACCGAACGA 306560 | ||||||| ||||| ||||| ||||| || || | || || | ||||| || || || Sbjct 19742 ATAATTAGCGAGCAACTGCTTGGTATCTTTCGGCAGACAGTAGCCGCCGTAGCCAAATGA 19801 Query 306561 TGGATTCGAATATCCCTGGCCAATTCGAGGTTCTAGAGTAACACCATCGATGATTTCTTT 306620 |||||| || | ||||| ||||| || || || || |||||||| | Sbjct 19802 TGGATTATTGTAGTGCGCACCAATACGAGGATCCAGGCCGACCCCTTCGATGATCTGACG 19861 Query 306621 CGCATTCATATCATGAGACATTGCGAATGTATCTAGTTCGTTGAAGTATGCAACTCGCAT 306680 || || || | | || | |||| | || || ||||||||||| || || || ||||| Sbjct 19862 CGAATCCAAACCGTGGGTGGCTGCGTACGTGTCAAGTTCGTTGAAATACGCTACACGCAT 19921 Query 306681 TGCAAGATACGTGTTAGAGAATAGTTTGACGGCCTCGGCTTCGCGAGTTCCCATCGTCAG 306740 || | ||| || || || || || || || || ||||| ||| || | | || Sbjct 19922 CGCCAAATAAGTATTTGAAAACAGCTTTACTGCTTCGGCCTCGGTAGAACTGGTGTAAAG 19981 Query 306741 AATAGGGGCAAGTGGAGTTTTA--GAACCTTCAACGAGAAGGTTTGCGAACTTAAGTGCA 306798 || || || | ||| | | |||||| || | || || || | ||| Sbjct 19982 GATCGGAACA--TCCTCTTTCAGCGCACCTTCCCGAAGCATATTGGCAAATATCTCGGCA 20039 Query 306799 CTAGGAGAATCATCTCCTACGATGATACGGGATGGATAGAGATTATCATACAAGGCTCTA 306858 | | || | || || ||||| ||||| || ||||| ||||| ||||| || || || Sbjct 20040 CGACTTGACTGCTCACCAACGATAATACGAGAAGGATAAAGATTGTCATATAACGCCCTG 20099 Query 306859 CCTTCACGCAGAAATTCTGGGGAGAAAATGATATT 306893 || || |||| ||||| || ||||||| ||||| Sbjct 20100 CCCTCCCGCAAGAATTCAGGTGAGAAAAAAATATT 20134 >seq3990 Length=3871 Score = 96.9 bits (106), Expect = 8e-15 Identities = 107/143 (75%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 334209 ATAGCGCGCATCAGAGTTGATTTACCCGCCCCGTTTGGCCCACACAGACCGTAGCGGTTT 334268 || ||||||||||| || || || ||||| ||||||| || ||||| |||||||| | Sbjct 2771 ATGGCGCGCATCAGCGTGGACTTGCCCGCGCCGTTTGCACCGCACAGCCCGTAGCGACGT 2830 Query 334269 CCACGCTTCAGATTGAACCGCGTATTGTTCAGAAGAATTTTTCCACCATATGCCAGAGAA 334328 || || || || ||| |||| ||||| || |||||| || |||||| |||| || Sbjct 2831 CCGCGTTTGAGCCTGAGGCGCGCGTTGTTTAGCAGAATTCGCCCGCCATATCCCAGTGAG 2890 Query 334329 AATTCACAATCACACAGATCCTC 334351 || ||||| | ||| || ||||| Sbjct 2891 AACTCACAGTTACAGAGCTCCTC 2913 >seq907 Length=16333 Score = 86.0 bits (94), Expect = 1e-11 Identities = 107/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 243289 TTTGCTGAGCGTCTCGTCGCCTGGGTGTGCGTTGAAGGTATTCTGTTTTCCGGGAGTTTC 243348 ||||| |||||||| | || | | ||| || || || || | || |||||| ||| Sbjct 11200 TTTGCGGAGCGTCTGATTGCGTTTGCGTGTGTGGAGGGCATCTTCTTCTCCGGGTCCTTC 11259 Query 243349 TGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAG 243408 ||| ||||||| ||||| ||| || | ||||| |||||| | | || |||||| Sbjct 11260 TGCTCCATCTTCTGGCTCAAGAAGCGCGGACTCATGCCCGGCCTCACTTTCTCAAACGAG 11319 Query 243409 TTCATCAGTCGCGACGAGGGCCTTCAC 243435 |||||||||| ||||||||||| ||| Sbjct 11320 CTCATCAGTCGGGACGAGGGCCTGCAC 11346 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102766968930650