Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq7728 131 2e-25 seq1162 113 5e-20 seq12 109 5e-19 seq585 96.9 3e-15 seq1176 95.1 1e-14 seq1233 89.7 5e-13 seq73 86.0 6e-12 >seq7728 Length=1087 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 ||||| |||| | || || || || | || || || || ||||||||||| || | Sbjct 274 CCGCCTCGCAGGCGCAGAACCAGGTGCAATGTGGACTCCTTCTGAATGTTGTAGTCCGAA 215 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | ||||| |||| || ||||||||||| ||| | ||||| |||||||| || || || Sbjct 214 AGCGTGCGGCCGTCCTCCAGCTGCTTGCCCGCAAAGATGAGGCGCTGCTGATCAGGGGGG 155 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396 || ||||| || || || || |||||||| ||| ||| | ||| || | || || || Sbjct 154 ATCCCTTCCTTGTCCTGGATCTTTTGCTTCACATTCTCGATTGTGTCGCTGGGCTCAACA 95 Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||| || | ||||||||| |||| || || ||||| || ||||| Sbjct 94 TCTAGGGTGATGGTCTTGCCCGTCAGGGTCTTGACGAAGATCTGCAT 48 >seq1162 Length=13745 Score = 113 bits (124), Expect = 5e-20 Identities = 109/140 (78%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 ||||| |||| | |||||| || || | || || || ||||| |||||||| || || Sbjct 13606 CCGCCACGCAGGCGAAGCACCAGGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCAGCC 13665 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | ||||||| | || |||||||||||||| ||| | || || |||||||||||||||||| Sbjct 13666 AGGGTGCGCCCATCCTCAAGCTGCTTGCCCGCAAAGATCAGACGCTGCTGGTCGGGAGGA 13725 Query 64337 ATTCCTTCTTTTTCTTGTAT 64356 || || || || || || || Sbjct 13726 ATGCCCTCCTTGTCCTGCAT 13745 >seq12 Length=84225 Score = 109 bits (120), Expect = 5e-19 Identities = 108/140 (77%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 ||||| |||| | |||||| | || | || || || ||||| |||||||| || || Sbjct 46 CCGCCACGCAGGCGAAGCACCAAGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCAGCC 105 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | ||||||| | || |||||||||||||| ||| | || || |||||||||||||||||| Sbjct 106 AGGGTGCGCCCATCCTCAAGCTGCTTGCCCGCAAAGATCAGACGCTGCTGGTCGGGAGGA 165 Query 64337 ATTCCTTCTTTTTCTTGTAT 64356 || || || || || || || Sbjct 166 ATGCCCTCCTTGTCCTGCAT 185 >seq585 Length=20866 Score = 96.9 bits (106), Expect = 3e-15 Identities = 97/126 (77%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 || ||||||| | ||||| || || | || || || || || |||||||| || || Sbjct 671 CCACCGCGCAGGCGCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCC 730 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | |||||| | || || ||||||||||| ||| |||| || ||||||||||| |||||| Sbjct 731 AGGGTGCGGCCATCCTCCAGCTGCTTGCCCGCAAAAATCAGGCGCTGCTGGTCAGGAGGA 790 Query 64337 ATTCCT 64342 |||||| Sbjct 791 ATTCCT 796 >seq1176 Length=13603 Score = 95.1 bits (104), Expect = 1e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 ||||| |||| | ||||| || || | || || || || || |||||||| || || Sbjct 12495 CCGCCACGCAGGCGCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCC 12554 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | |||||| | || || ||||||||||| ||| |||| || ||||||||||| |||||| Sbjct 12555 AGGGTGCGGCCATCCTCCAGCTGCTTGCCCGCAAAAATCAGGCGCTGCTGGTCAGGAGGA 12614 Query 64337 ATTCCTTCTTTTTCTTG 64353 || || || || || || Sbjct 12615 ATGCCCTCCTTGTCCTG 12631 Score = 89.7 bits (98), Expect = 5e-13 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 |||||||||| | ||||| || || | || || || || || |||||||| || || Sbjct 13254 CCGCCGCGCAGGCGCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCC 13313 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | |||||| | || || ||||||||||| ||| |||| || ||||||||||| || || Sbjct 13314 AGGGTGCGGCCATCCTCCAGCTGCTTGCCCGCAAAAATCAGGCGCTGCTGGTCAGGGGGG 13373 Query 64337 ATTCCTTCTTTTTCTTG 64353 || || || || || || Sbjct 13374 ATGCCCTCCTTGTCCTG 13390 >seq1233 Length=13172 Score = 89.7 bits (98), Expect = 5e-13 Identities = 87/112 (78%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 || ||||||| | ||||| || || | ||| || ||||| || ||||||||||| || Sbjct 13061 CCACCGCGCAGGCGCAGCACCAGGTGCAGCGTGGACTCTTTCTGGATGTTGTAATCGGCA 13120 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGT 64328 | |||||| |||| || ||||||||||| ||| | || || |||||||||| Sbjct 13121 AGGGTGCGGCCGTCCTCCAGCTGCTTGCCCGCAAAGATCAGGCGCTGCTGGT 13172 >seq73 Length=47289 Score = 86.0 bits (94), Expect = 6e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 ||||| |||| | || || || |||| ||| || ||||| || ||| |||| || || Sbjct 32400 CCGCCACGCAGGCGCAGTACCAGGTGAAGCGTGGACTCTTTCTGGATGCTGTAGTCGGCC 32459 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | |||||| | || |||||||||||||| | | || | ||||||||||||||||| Sbjct 32460 AGGGTGCGGCCATCCTCAAGCTGCTTGCCCGTGAAGATTAAGCGCTGCTGGTCGGGAGGG 32519 Query 64337 ATTCCTTCTTTTTCTTG 64353 || || || || || || Sbjct 32520 ATGCCCTCCTTGTCCTG 32536 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499594841765560