Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_010342.1 Length=39245 Score E Sequences producing significant alignments: (Bits) Value seq1 289 7e-74 >seq1 Length=201307 Score = 289 bits (320), Expect = 7e-74 Identities = 427/596 (72%), Gaps = 18/596 (3%) Strand=Plus/Plus Query 21282 AAACCATTCATTCAGTGGATGGGCGGCAAGCGCCGCCTGGCTAAACATATCCTGCCGAAC 21341 ||||| |||| | ||| |||| ||||||||||||||||| | | || || || | Sbjct 59664 AAACCGATCATCCCCTGGTTGGGTGGCAAGCGCCGCCTGGCCGACAAGATTCTTCCCCAT 59723 Query 21342 TTCCCTGACCACCAGTGCTACGTTGAGCCCTTCGCGGGCGGCGCGGC---GCTGTTCTTC 21398 || ||| | || |||||||| ||||| ||||||||||| ||||| ||||||| | Sbjct 59724 TTTCCTAAGCATTCCTGCTACGTCGAGCCTTTCGCGGGCGGGGCGGCACTGCTGTTCGCC 59783 Query 21399 ATGAAGCAACCCAGCAAAGTGGAGGTGATCAACGACACCAACAGCGACCTGGTCAACTTG 21458 | | | | || ||| || |||||| | ||||| | |||| |||||||||||||| | Sbjct 59784 AGGCCGGAGCCGGCCAAGGTCGAGGTGCTGAACGATATCAACGGCGACCTGGTCAACCTC 59843 Query 21459 TACCGGGTGGTGCAGCACCACCTGGAGGAGTTCGTGCGCCAGTTCAAGTGGGCGCTGGTC 21518 ||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| | Sbjct 59844 TACCGCGTGGTGCAGCACCACCTGGAAGAGTTCGTGCGCCAGTTCAAGTGGGCGCTGACC 59903 Query 21519 TCGCGTGAGATGTTCGCGTGGGAGAAGCTCAAGCACACCGACACGCTAACGGATATCCAG 21578 || |||||||| |||| |||| | || |||| ||||| || ||||| ||| Sbjct 59904 AGCCGGCAGATGTTCAAGTGGCAGAAAGAAACGCGGCCCGAGACGCTGACTGATATTCAG 59963 Query 21579 CGGGCCGCGCGGTTCTACTACCTGCAGCAGCAGGGGTTTGGCGGGAAGGTCAA--CTC-G 21635 ||||| || || |||||||||||| |||| | | || |||| ||| | | || | Sbjct 59964 CGGGCGGCCCGCTTCTACTACCTGATGCAGAACTGCTTCAGCGGCAAGCTGGAGGGTCAG 60023 Query 21636 AACTTTGGCATCTCGACCACGTCTGGCCCTGGGCTTAACCTGCTGCGGATCGAGGAGAAC 21695 | || |||| | | || ||| | || ||||| |||||||| ||| | || || ||| Sbjct 60024 ACGTTCGGCACCGCAACGACGGCGCCGCCGGGGCTGAACCTGCTCCGGCTGGAAGA-AAC 60082 Query 21696 CTCAGCC-AGGCGCACTTGCGGCTCTCGCGCGTGTTCGTTGAGAACATG----GACTGGA 21750 | || || ||| | || || |||| | | ||| ||| | || | ||||| Sbjct 60083 GTTGTCCGCAGCCCACCTTCGCCTGGCGCGTATCTACGTGGAGCATCTGCCCTGGCTGGA 60142 Query 21751 AAGCGGTCATGAAGCGCTACGACCGGCCGCACACGTTGCACTATCTCGACCCGCCGTATT 21810 ||| |||||||||||||| ||||||||||| | ||| | |||||||| || | Sbjct 60143 TTGCG----TGAAGCGCTACGACAGGCCGCACACGCTCTTCTACATGGACCCGCCCTACT 60198 Query 21811 GGGCGACCGCTGGCTA-TGATTGCGAGTTCCCGTTCGAGGAGTATGAGGCGATGGC 21865 ||| || || ||||| || || || ||| ||||| |||| | ||||||||| Sbjct 60199 GGGACACGGCCGGCTACGGAGTG-GAATTCGGCATCGAGCAGTACGCGGCGATGGC 60253 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 125450482561866