Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_011273.1 Length=164602 Score E Sequences producing significant alignments: (Bits) Value seq44 886 0.0 seq950 389 4e-103 seq555 123 3e-23 seq706 100 3e-16 seq1612 95.1 1e-14 seq180 95.1 1e-14 seq126 87.8 2e-12 >seq44 Length=56345 Score = 886 bits (982), Expect = 0.0 Identities = 764/942 (81%), Gaps = 4/942 (0%) Strand=Plus/Minus Query 155935 GCCATCAACTGGAACCGCGTGATCGACGAGAAGGACGCGGAGGTGTGGAACCGGCTGACC 155994 |||||||||||||||||| | ||||| ||||||| ||||||||||||||| || || Sbjct 3693 GCCATCAACTGGAACCGCATCGAGGACGACAAGGACGTGGAGGTGTGGAACCGCCTCACG 3634 Query 155995 AACAACTTCTGGCTGCCGGAGAAGATCCCGGTGTCCAATGACGTCCAGTCGTGGCACCAG 156054 ||||||||||||||| |||||| | ||| | ||||||||||| ||||||||| | Sbjct 3633 GGCAACTTCTGGCTGCCCGAGAAGGTGCCGCTCTCCAATGACGTGCAGTCGTGGGCGACG 3574 Query 156055 CTGACCGAGGAAGAGCGCCTGATCACCATGCGGGTGTTCACCGGCCTGACGATGCTGGAC 156114 |||||| |||||||| | | |||| |||||||||||||||||||| || |||| ||| Sbjct 3573 CTGACCCCGGAAGAGCAGCAGCTCACGATGCGGGTGTTCACCGGCCTCACCCTGCTCGAC 3514 Query 156115 ACCATCCAGGGCACCGTCGGCGCGGTCTCGCTCATCCCGGACGCCATCACCCCGCACGAG 156174 || ||||||||||| || |||||||||||||||||||| ||||| | |||||||||||| Sbjct 3513 ACGATCCAGGGCACGGTGGGCGCGGTCTCGCTCATCCCCGACGCGCTGACCCCGCACGAG 3454 Query 156175 GAGGCGGTGTACACCAACATCGCGTTCATGGAGAGCGTGCACGCACGCAGCTACTCGAAC 156234 ||||| || ||||| |||||||||||||||||| |||||||| ||||||||| Sbjct 3453 GAGGCCGTCTACACGAACATCGCGTTCATGGAGTCGGTGCACGCCAAGAGCTACTCGTCG 3394 Query 156235 ATCTTCTCGACGCTGTGCTCCACCAAGGAGATCGACGCCGCGTTCCGCTGGTCGGAGGAG 156294 ||||||||||||||||||||||| ||||||||||||| ||||||||||||||| ||| Sbjct 3393 ATCTTCTCGACGCTGTGCTCCACGAAGGAGATCGACGAGGCGTTCCGCTGGTCGATCGAG 3334 Query 156295 AACGCCAACCTGCAGAAGAAGGCTGAGATCGTGCTCAGCTACTACAACGGTGACGACCCG 156354 |||| ||||||||| |||||| ||||||| | ||||||| ||| ||||| || Sbjct 3333 AACGAGAACCTGCAGCGCAAGGCTCAGATCGTCATGGACTACTACCGCGGCGACGAACCC 3274 Query 156355 CTCAAGCGCAAGGTCGCCTCCACGCTGCTGGAGGGCTTCCTGTTCTACAGCGGCTTCTAC 156414 |||||||||||||| ||||| |||||||| ||| ||||| ||||| ||||||||| Sbjct 3273 CTCAAGCGCAAGGTGGCCTCGACGCTGCTCGAGTCGTTCCTCTTCTATTCGGGCTTCTAC 3214 Query 156415 CTGCCGATGTTCTGGTCGTCGCGAGGCAAGCTCACCAACACCGCCGACATGATCCGGCTC 156474 ||||||||| ||||||| || | ||||||||||||||||||||||||||||| ||| Sbjct 3213 CTGCCGATGCACTGGTCGAGCCGCGCGAAGCTCACCAACACCGCCGACATGATCCGCCTC 3154 Query 156475 ATCATCCGGGACGAGGCCGTGCACGGCTACTACATCGGCTACAAGTTCCAGAAGGGCCTG 156534 |||||||| |||||||||||||||||||||||||||||||||||||||||| ||| || Sbjct 3153 ATCATCCGCGACGAGGCCGTGCACGGCTACTACATCGGCTACAAGTTCCAGCGGGGACTC 3094 Query 156535 GAGAAGGAGACCAAGGCCCGCCAGCAGGAACTCAAGGACTACACCTATGAGCTGCTGTTC 156594 ||||||| | | ||| || ||||| || || |||||||||| |||||||| | Sbjct 3093 GAGAAGGTGGACGAGGAAACCCGTCAGGAGCTGAAAGACTACACCTTCTCGCTGCTGTAC 3034 Query 156595 GAGCTGTTCGACAACGAGCAGGAGTACACCCAGGACCTCTACGACGCCACCGGCCAGACC 156654 ||||| | |||||||||| | ||||||| |||||||||||||||| | ||| | ||| Sbjct 3033 GAGCTTTACGACAACGAGGTGCAGTACACGCAGGACCTCTACGACGGCGTCGGTCTCACC 2974 Query 156655 GAGGACGTGAAGAAGTTCCTGCGGTACAACGGCAACAAGGCCCTGCAGAACCTGGGCTAC 156714 |||||||| ||||||||||||| ||||||| ||||||||| || |||||| |||||| Sbjct 2973 GAGGACGTCAAGAAGTTCCTGCACTACAACGCCAACAAGGCGCTCATGAACCTCGGCTAC 2914 Query 156715 GACGCGCTGTTCAGC-CG-CAGCGACTGCGACGTCAACCCGGCCATCCTGAGCGCGCTGT 156772 || || ||||| | || | | ||| | |||||| |||||| ||||| || |||| Sbjct 2913 GAAGCCATGTTCCCCTCGACGGTGAC--CAACGTCAGCCCGGCGATCCTCTCGGCACTGT 2856 Query 156773 CGCCCGGTGGAGACGAGAACCACGACTTCTTCTCGGGGTCGGGCAGCACGTACGTCATGG 156832 ||||| | ||||||||||||||||||||||| || |||||| |||| ||||| | Sbjct 2855 CGCCCAACGCCGACGAGAACCACGACTTCTTCTCCGGCTCGGGCTCGTCGTATGTCATCG 2796 Query 156833 CCAAGGGTGTGGTCACCGAAGACGACGACTGGGACTTCTGAT 156874 ||||| ||| | ||||| |||||||||||||||||||||| Sbjct 2795 GCAAGGCTGTCGCGACCGAGGACGACGACTGGGACTTCTGAT 2754 >seq950 Length=16003 Score = 389 bits (430), Expect = 4e-103 Identities = 341/425 (80%), Gaps = 0/425 (0%) Strand=Plus/Plus Query 152886 ATCTTCGAGAGATTCACCGACCGCGCCCGTCGCGTCTGCGTCCTCGCCCAAGAGGAAGCG 152945 || |||||||||||||||||||| |||||||| || || |||||||| || || ||| Sbjct 2782 ATGTTCGAGAGATTCACCGACCGAGCCCGTCGTGTGGTTGTGCTCGCCCAGGAAGAGGCG 2841 Query 152946 CGCATGCTCAACCATGCGTACATCGGCACCGAGCATCTGCTGCTCGGGCTGGTCCACGAG 153005 ||||||||||| ||||||||||| ||||| | ||||| || || |||||||| Sbjct 2842 AAGATGCTCAACCACAACTACATCGGCACAGAGCACATCCTGCTGGGCCTCATCCACGAG 2901 Query 153006 GGCGAGGGCGTAGCCGCCAAGGCGCTGCAGGCGCTCGACATCAACCTGGAGGAGGTGCGT 153065 ||||||||||| ||||||||||| || || |||||| |||| || || | ||||| Sbjct 2902 GGCGAGGGCGTCGCCGCCAAGGCCCTCGAGTCGCTCGGCATCTCGCTCGACGCCGTGCGC 2961 Query 153066 GCCGAGGTCGAGGAGATCATCGGCCACGGCCAGCAGGCACCCACCGGGCACATCCCGTTC 153125 | |||| |||| ||||||||||| || |||||| || || ||||||||||||||| Sbjct 2962 GAGCAGGTGCAGGACATCATCGGCCAGGGTCAGCAGCAGCCGACGGGGCACATCCCGTTC 3021 Query 153126 ACCGACCGCTCCAAGCGCGTCCTGGAGCTGTCGCTGCGCGAGGCGCTGCAGCTCGGCCAC 153185 || ||| ||||| || || ||||||||||||||||||||| |||||||||||||| Sbjct 3022 ACGCCGCGCGCCAAGAAGGTGCTCGAGCTGTCGCTGCGCGAGGCGTTGCAGCTCGGCCAC 3081 Query 153186 AACTACATCGGCACCGAGCATCTCCTGCTGGCCCTGATCCGCGAGGGTGAGGGCGTGGGC 153245 |||||||||||||||||||| |||| || | ||||||||||||||||||||| || | | Sbjct 3082 AACTACATCGGCACCGAGCACATCCTCCTCGGCCTGATCCGCGAGGGTGAGGGTGTCGCC 3141 Query 153246 TGCCAGGTGCTGGTGAAGCGCGGCGCGGAGCTGACCAAGGTCCGCCAGGTGGTCATCCAG 153305 |||||||| || |||| |||||| || |||| |||||| |||||| |||||||||| Sbjct 3142 GCGCAGGTGCTCGTCAAGCTCGGCGCCGACCTGAACAAGGTGCGCCAGCAGGTCATCCAG 3201 Query 153306 CTGCT 153310 ||||| Sbjct 3202 CTGCT 3206 >seq555 Length=21523 Score = 123 bits (136), Expect = 3e-23 Identities = 213/302 (71%), Gaps = 17/302 (6%) Strand=Plus/Minus Query 11891 GTGGGCGGCTCGGTGCGCGACCTGCTGCTGGCCAAGACGCCGAAGGACTTCGACTTCACC 11950 ||||||||| |||||||||| |||| | | | || || | ||| |||||||| || Sbjct 20114 GTGGGCGGCCCGGTGCGCGATGCGCTGATCGGCCGCCCGACGCACGACCTCGACTTCGCC 20055 Query 11951 ACTGACGCGCTGCCCAAAGAGATCCAGGGCATCCTG-CGC-GA-CTGGGCCGACGCGGTG 12007 || |||||| |||| | || |||| | | ||| | ||| || || || ||| | Sbjct 20054 ACGAACGCGCGGCCCGATGACATCCTGCGGATCGTCACGCCGATCT---CCACCGCCCAG 19998 Query 12008 TGGGACGTCGGTGCGCG-GTTCGGCACGATCGCCGCCCAGAAGGACGGCTTCGAGATCGA 12066 |||||| |||| ||| | |||||||||||||| ||| | | ||| || |||| Sbjct 19997 TGGGACATCGG-GCGGGCGTTCGGCACGATCGGCGCGCGCGTACAGGGCGAGCAGGTCGA 19939 Query 12067 GATCACGACCAT--GCGCC-------ACGACGGTCCGGGCCGCAAGCCCGAGGTGGTGTT 12117 ||||||||| ||||| ||||||| || ||||||||||| ||| | || Sbjct 19938 GATCACGACGTACCGCGCCGACAACTACGACGGGGCGACCCGCAAGCCCGTGGTCGCCTT 19879 Query 12118 CACCGACGACATCATCGAGGACCTGGTGCGCCGGGACTTCACCATCAACGCGATGGCGAT 12177 | ||||| || ||| ||||| |||||||| |||||||| |||||||||||||| | Sbjct 19878 CGGCGACGTGCTCGACGACGACCTCGTGCGCCGCGACTTCACGGTCAACGCGATGGCGCT 19819 Query 12178 GC 12179 || Sbjct 19818 GC 19817 >seq706 Length=18769 Score = 100 bits (110), Expect = 3e-16 Identities = 127/174 (73%), Gaps = 3/174 (2%) Strand=Plus/Plus Query 41286 GGCCTGATCAACGCGCTGATGCGCGACCGTCACGGCACTCCGTTCGAGCACATGAACGTC 41345 ||||| |||||| ||||||||||||||||||||| | ||||||||||||| || Sbjct 2717 GGCCTCATCAACTACCTGATGCGCGACCGTCACGGCTCGCCGTTCGAGCACAACTCGCTC 2776 Query 41346 ACGGTCCGGGTCACCGCACCGATCTTCGTCTGGCGCGAGCACCATCGTCACCGGGCGGGG 41405 || || || || || |||||||| | |||||| | || ||||| | | Sbjct 2777 ACCTTCTACGTGCAGGCGCCCATCTTCGTGTTCCGCGAGTTCATGCGCCACCGCATCGCG 2836 Query 41406 TTCAGCTACAACGAGGAGTCGGGCCGCTACAAGCAGCTCGATCCGGTGTTCTAC 41459 ||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct 2837 ---AGCTACAACGAGGAGTCGGGCCGCTACCGCGAGCTGCGTCCGGTGTTCTAC 2887 >seq1612 Length=10544 Score = 95.1 bits (104), Expect = 1e-14 Identities = 70/82 (85%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 153180 GGCCACAACTACATCGGCACCGAGCATCTCCTGCTGGCCCTGATCCGCGAGGGTGAGGGC 153239 |||||||||||||| ||||| ||||| ||||||||| |||| | ||||||||||||||| Sbjct 3339 GGCCACAACTACATTGGCACTGAGCACATCCTGCTGGGCCTGCTGCGCGAGGGTGAGGGC 3280 Query 153240 GTGGGCTGCCAGGTGCTGGTGA 153261 |||| || || ||||||| || Sbjct 3279 GTGGCCTCCCGTGTGCTGGAGA 3258 >seq180 Length=35712 Score = 95.1 bits (104), Expect = 1e-14 Identities = 193/283 (68%), Gaps = 8/283 (3%) Strand=Plus/Minus Query 161956 CTGTGGGAGACCTTCGGCGGCACCACCAACGCCGAG---GGCTACCGCGAGCTGGACCCG 162012 |||||||| | |||||||||| | ||||| |||||| |||||||||| Sbjct 29209 CTGTGGGACATCTTCGGCGGCGTGGTGA---CCGAGCGCGGCTACAAGCTGCTGGACCCG 29153 Query 162013 CACATCGGTGCCATCTACGGCGACAGCATCACGCTCGATCGCGCACAGGCGATCCTGGCC 162072 ||| |||| ||||||||||| ||||||||| | || | | | ||||||| Sbjct 29152 CACGTCGGCCTGATCTACGGCGATTCCATCACGCTGGCGCGTGGCCGCGACATCCTGGTG 29093 Query 162073 AACCTGCAGCGTCAGGGCTTCGCTGCCAGTAACGTCGTGTTCGGCGTGGGCAGCTACACG 162132 || | | |||| || || || | ||||| || | ||| | ||| |||||| Sbjct 29092 CGGTTGGAAAGAAAGGGGTTTGCGTCCGGCAACGTGGTCCTGGGCATCGGCTCCTACACC 29033 Query 162133 TACCAGTACAACACCCGCGACACGTTCGGTTCAGCAATGAAGGCGACGTGGGCGCAGGTC 162192 ||||| ||| |||||||||| ||||| | || | |||||||||| || ||||| Sbjct 29032 TACCAATACCTGACCCGCGACAGCTTCGGCTGGGCGCTCAAGGCGACGTACGCCGAGGTC 28973 Query 162193 AACGGC-AAGGGCGTGAACCTGTTCAAGGACCCGATCACCGAC 162234 || ||| || || ||| ||| | ||||||||| | |||||| Sbjct 28972 AATGGCGAACCGCAGGAA-CTGGTGAAGGACCCGGTGACCGAC 28931 >seq126 Length=40266 Score = 87.8 bits (96), Expect = 2e-12 Identities = 99/132 (75%), Gaps = 3/132 (2%) Strand=Plus/Minus Query 78191 ATGTACGCCAACACCGCCGTGCCCGAGTCGCTGAACTTCCCGCACGAGGCCGTCGGCCAC 78250 ||||| |||||| || | |||||||| || || ||| ||| ||||| || || ||| | Sbjct 17612 ATGTATGCCAACTCCTCGGTGCCCGAATCTCTCGACTACCCCCACGACGCGGTTGGCAGC 17553 Query 78251 GACCACGACTCGGTGGGCCTGTTCCAGCAGCGCCAGAC---CTGGGGCACCATCGACCAG 78307 |||||||||||||| | |||||||||||| | | |||||||||| |||| | Sbjct 17552 GACCACGACTCGGTCAACTACTTCCAGCAGCGCGTGTCGGGCTGGGGCACCGTCGAGGAT 17493 Query 78308 CGCATGAACCCC 78319 | |||| ||||| Sbjct 17492 CTCATGGACCCC 17481 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 526545746742480