Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_011357.1 Length=62147 Score E Sequences producing significant alignments: (Bits) Value seq313 107 8e-19 >seq313 Length=28640 Score = 107 bits (118), Expect = 8e-19 Identities = 201/293 (69%), Gaps = 7/293 (2%) Strand=Plus/Plus Query 52485 TACCATATCCGAGGTCGCATCATCCAGGTGCCGTCAAACTATGACCCGGAAAAACGCACG 52544 ||||| | || || |||||||||| ||||||||| |||||| ||||||| ||| Sbjct 19524 TACCACGTGCGCGGCCGCATCATCCGGGTGCCGTCCAACTATCACCCGGACCTGCGCCGC 19583 Query 52545 TACAGCGGCATCTGGGACGGCAGCCTGAAACCGGCATACAGCAACAACCCGGCCTGGTGC 52604 || |||| | |||||||||| | | || | ||| | | |||||||||||||||| Sbjct 19584 TATGACGGCGTGTGGGACGGCACCTTCAAGCTGGCCTGGACCAACAACCCGGCCTGGGTG 19643 Query 52605 CTGTGGGACATGCTGACTCACCCGCGCTACGGCATGGGAAAACGCCTGGGGGCGGCGGAT 52664 | | ||| | | | || ||||| ||| |||| | ||| || |||| || | Sbjct 19644 TTCTACGACCTCATCAGCAACGACCGCTATGGCCTGGGCACGCGCGTGCCGGCG--GGCT 19701 Query 52665 G--TGGACAAGTGGGCGCTGTATGCCATTGCGCAGTACTGCGACCAGATGGTCCCTGATG 52722 | |||||||||||| ||||| || | | || |||||| |||||||| ||| | Sbjct 19702 GGCTGGACAAGTGGGGCCTGTACCAGATCGGCCGCTATTGCGACGAGATGGTCGATGACG 19761 Query 52723 GTTTCGGGGGCACAGAGCCGCGGATGACCTTTAATGCGTACCTGTCACAACAG 52775 | ||||| || | || ||||| | |||| || | |||||| |||||| Sbjct 19762 GCTTCGGCGGAAAGGAACCGCGCTTCACCTGCAACGTCTACCTG---CAACAG 19811 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 198726224726212