Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_011373.1 Length=46872 Score E Sequences producing significant alignments: (Bits) Value seq424 565 7e-157 seq75 277 5e-70 >seq424 Length=24479 Score = 565 bits (626), Expect = 7e-157 Identities = 606/796 (76%), Gaps = 30/796 (4%) Strand=Plus/Plus Query 33267 GCCATCGTCGTCATCGCCTTGCTCGGACAGGCCGGTGATAGCCTTCAGCGTGTATCGCTC 33326 ||| |||| ||| ||| || ||||||||||||||||| ||||| |||||||| ||||| Sbjct 23646 GCCGTCGTTGTCGTCGTTCTGTTCGGACAGGCCGGTGATTGCCTTGAGCGTGTAGCGCTC 23705 Query 33327 CAGGTAGGTTTTGGTGCTGGCTCTGGCCTGGATGGCGTTCTTCGCGCCACCGGTATCTGG 33386 || ||||| ||||||||||||| ||||| ||||| ||||| ||||| ||| | || || Sbjct 23706 CAAATAGGTCTTGGTGCTGGCTCGAGCCTGAATGGCATTCTTGGCGCCGCCGTTGTCCGG 23765 Query 33387 CGGCCCGCCCATGCTTACGCTTTCCTCGTGGCCTCCAACATGGCGGAGGTAGCAGGTAAC 33446 || ||||||||||| ||||||||||||||||| || || ||||| | ||||||||| || Sbjct 23766 GGGGCCGCCCATGCTGACGCTTTCCTCGTGGCCGCCCACGTGGCGCAAGTAGCAGGTCAC 23825 Query 33447 TTCCATCCAGTCTTTCTCGTCGCGAGTGAGCTTCCACGAAGAGGAAAGTCCGTGCTTGGA 33506 |||||||||||| | |||||||| ||||||||||| ||||| || || || |||||||| Sbjct 23826 CTCCATCCAGTCTCTGTCGTCGCGCGTGAGCTTCCAGGAAGACGACAGGCCATGCTTGGA 23885 Query 33507 GAGCGCCGGAGTGACTGCATTCACCACATCATGCAACTCGGCGTAGCTCTTGTTCTTCAA 33566 ||||||||||||||| || || || || || |||| |||||||||| ||||| |||||| Sbjct 23886 GAGCGCCGGAGTGACCGCGTTGACGACGTCGTGCAGCTCGGCGTAGGTCTTGCCCTTCAA 23945 Query 33567 TGGGCCATCGGTGA--CCTTTCGGCCCTTTATGATGATCACCGCCTCAGCCTTGAAGTTG 33624 |||||||| |||| || || |||||| ||||| | |||||||| |||||||||||| Sbjct 23946 GGGGCCATCCGTGACGCCCTT--GCCCTTGATGATCTTGACCGCCTCGGCCTTGAAGTTG 24003 Query 33625 GCGAAGGCGGCGTCGTAGGCCTTTTTCGCCTCGGCTTTCTCCCAGCGCTCTTGAAGGTCC 33684 ||||| || ||||||||||||| || |||||||| || ||||||| ||||| |||||| Sbjct 24004 GCGAACGCCTCGTCGTAGGCCTTCTTGGCCTCGGCCTTGGCCCAGCGTTCTTGCAGGTCC 24063 Query 33685 ATCATCTTTTCGACCTGTTCCAGTGTGGCTCCTTGCTTCACTGCGGCTAGCATCATTCCC 33744 |||||||| |||||||| || || ||||| ||||||| ||| ||||| |||||||| ||| Sbjct 24064 ATCATCTTCTCGACCTGCTCGAGCGTGGCGCCTTGCTGCACGGCGGCCAGCATCATCCCC 24123 Query 33745 ATGGGGGAGTTGGCGGCCA----------CTG--CTGGGGTTGCT-----GAGATTGG-- 33785 ||||| || |||||||||| ||| | ||||| | | | | ||| Sbjct 24124 ATGGGCGAATTGGCGGCCAGCGCCGGCACCTGGCCAGGGGTCGGTTCGGGGCGGGTGGCC 24183 Query 33786 ATTT-----GCGGGGGAGCCTATTACCTCGTTCATGTCGACCTCAGTATTGAATGGAGAT 33840 | || || |||| | | || | || ||||| | ||||| || || ||| Sbjct 24184 ACTTCGCGGGCCGGGGCGTCGATGATTTCCGTCATGGCTTCCTCAATAGGTGATACGGAT 24243 Query 33841 GTGAGGAACCTTGCGCTGAGCGATCAGTGTGATCGCCTGCTTGGCGCATTCCTCGGGCAT 33900 || || | || || |||||||| |||| ||||||||||||||| ||||||||||| Sbjct 24244 GTTGGGGATGGCGCCCTTGGCGATCAGCGTGACCGCCTGCTTGGCGCAGTCCTCGGGCAT 24303 Query 33901 GCCGCCGGCGATCAGGGCCGCCAGGGCTTCGTTGTTGAtttttttCTTGTGGGCCTTGTC 33960 |||| | || | ||| ||||||| | |||||| || |||||| |||||||| Sbjct 24304 GCCGGCCAGGACAAAGGCATCCAGGGCGGTGCGGTTGATGCTTGCCTTGTGCGCCTTGTC 24363 Query 33961 GGCTTCTCGGGCTGCTGCCTCGCGCT-CGATCCTGGCCTGCTCGTCTGCCTGCCGTTGGC 34019 ||| || ||| || | ||| ||| | | |||||||||||| || || |||| Sbjct 24364 GGCCTCGCGGCGCGCGGTTTCG-GCTGCCGCCGCGGCCTGCTCGTCGGCAATGCGCTGGC 24422 Query 34020 GCTCTGCGGCAGCGGC 34035 | || ||||| ||||| Sbjct 24423 GTTCGGCGGCGGCGGC 24438 >seq75 Length=46716 Score = 277 bits (306), Expect = 5e-70 Identities = 513/740 (69%), Gaps = 21/740 (3%) Strand=Plus/Plus Query 34148 TCGGCGGCAGCCTTTGCCTCGGTTTCTCGGCGAGCGGCGGCTTCGTGTTCTTCCTGGGCG 34207 ||||| || ||| ||||||| ||| ||||| |||||||| ||| | || |||||||| Sbjct 104 TCGGCAGCGGCCAGGGCCTCGGCTTCGCGGCGGGCGGCGGCGTCGCGCTCGGCCTGGGCG 163 Query 34208 CGTCGTTCCGCTGCCAGGCGCTCGGC---CTCGGCTGCTTCGCGGGCAATGCGTTCCTCG 34264 || || ||| | ||||| ||| |||||| ||||||||||| ||||| || || Sbjct 164 CGGGTCTCTGCTTC---GCGCTGGGCGCGCTCGGCCGCTTCGCGGGCGATGCGCTCTTCA 220 Query 34265 CGCTCTTTCTGCTCGCGAGCAGCAGCTTCGGCGCGCAGTCGCTCCAGCTCGGCCTGCTCG 34324 || || ||||| |||| | || | |||| ||||| ||| |||| |||||||||||| Sbjct 221 CGTTCCTTCTGTGCGCGCTCGGCTTCAGCGGCACGCAGGCGCGCCAGTTCGGCCTGCTCG 280 Query 34325 GCTTCATACTTCTCGCGTGCAACGAGGGCTTCGCG-CAGCGCGGCCAGGGCCTTATCCTT 34383 || || ||||||||||| || | ||||||| ||| ||| | || |||| |||| Sbjct 281 GCGTCGTACTTCTCGCGCGCCGCCAGGGCTT-GCGTCAGGGAATCCTGGGCGCGGGCCTT 339 Query 34384 GGTGCGGGCGGCCTCGGTTTCGAACTCTTCCCAGTCTGCGCCAATGGATAGGCCTTCCAG 34443 | |||| ||||||| ||| | || |||||| || | | || || | | || Sbjct 340 GACGCGGTGCGCCTCGGCCTCGTATTCCTCCCAGGACGCATCCACGGCGCGGGCATTCAC 399 Query 34444 CCATTCAATGTTGGCTTTCAACTCGGTCGAATCTAGGTCTCGGCATTC--CAG-GCGCAG 34500 | ||| ||| | || || |||||||| ||| ||||| ||| || | | |||||| Sbjct 400 CTCTTCGATGGTCGCGCGCAGCTCGGTCGCATCCAGGTCGCGGTGCTCGTCGGCGCGCAG 459 Query 34501 GTTGATCTGATCGATGCCGGCCTGGTGTTTGGCCTTGCGCATTTCCTCGCGCTGC-TCCC 34559 | || | |||| || |||||| || ||| ||||||| || || |||| Sbjct 460 GCGGAACCACTCGACACCCTGCTGGTGGCGCTGCTCGCGTGCTTCCTCG-GCGGCTTCCC 518 Query 34560 ACTCCGTTAGGGGCTGGCGTACCTCTGCCTGCCAG-GAGTCCAGCAGGTCACGCATGCGC 34618 | | || || ||| ||| |||||| | ||||| | |||||| ||| ||||||||| Sbjct 519 ATGCGGTCAGCGGCGCGCGCACCTCT-TCGGCCAGCGCGTCCAGGGTGTCGCGCATGCGC 577 Query 34619 TTACGCTCGGCGTCGACCTTCTTCGGCACTTCCTTCAGCTCGGCGACCAGTTCCTTGCCT 34678 || ||||| ||||||| ||| || || ||||| || ||| ||||||| | |||||| Sbjct 578 TTGCGCTCCGCGTCGATGCGCTTGGGGACGTCCTTGAGTTCGTCGACCAGCTGCTTGCCC 637 Query 34679 ACGTTGTCCAGCGCCGTCTTGGA---GCGGGCTACCTTGTAGGCGATGGAGGCGATGGCC 34735 | | ||||||||| ||||| || |||| |||||| | || | | |||| ||||| Sbjct 638 AGGGCGTCCAGCGCGGTCTTCGATTTGCGG---ACCTTGAACGCCAGGCTGGCGGTGGCC 694 Query 34736 TCTCTGCCCTTGCGGGTAGTGACGTCTGGCACGAAGCCGTCGATCTCTTCGCGAATCTTG 34795 || | ||| || ||| | | ||| |||||| |||| | || |||| |||||| Sbjct 695 TCACGGCCTTTCTTGGTCGACATGTCAGGCACGTGGCCGGACACTTCGGCGCGGATCTTG 754 Query 34796 GCCAGGAACGGGTCAAGGCCATTGGCGGCCGAGTAGACTTGGAGGGCGGTTTCTTTGGCC 34855 ||||| | || || ||||| ||| || || || | || |||||||| | || | Sbjct 755 GCCAGCCAGGGCTCCAGGCCGCTGGGCTTGGAATACACCTCCAGCGCGGTTTCCTGGGGC 814 Query 34856 GGCACTTCGACCAGTTGGGT 34875 |||| |||| | |||| ||| Sbjct 815 GGCAGTTCGGCGAGTTCGGT 834 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 149854564243692