Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq7728 100 3e-16 seq73 91.5 1e-13 seq12 91.5 1e-13 seq1162 87.8 2e-12 >seq7728 Length=1087 Score = 100 bits (110), Expect = 3e-16 Identities = 162/233 (70%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 126885 CTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGC 126944 |||| || || | |||| |||| || | || ||||| || ||||| ||||| || Sbjct 276 CTCCGCCTCGCAGGCGCAGAACCAGGTGCAATGTGGACTCCTTCTGAATGTTGTAGTCCG 217 Query 126945 CCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAG 127004 | |||||| || || ||||| || || || |||| | ||||||||||| || | Sbjct 216 AAAGCGTGCGGCCGTCCTCCAGCTGCTTGCCCGCAAAGATGAGGCGCTGCTGATCAGGGG 157 Query 127005 GTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGA 127064 | || || ||||||||| ||| || ||||| | | |||| ||||| | ||| | Sbjct 156 GGATCCCTTCCTTGTCCTGGATCTTTTGCTTCACATTCTCGATTGTGTCGCTGGGCTCAA 97 Query 127065 CTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 127117 | || | ||| | || ||||| ||||| || || || || |||||||||||| Sbjct 96 CATCTAGGGTGATGGTCTTGCCCGTCAGGGTCTTGACGAAGATCTGCATGGCT 44 >seq73 Length=47289 Score = 91.5 bits (100), Expect = 1e-13 Identities = 94/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958 |||| |||| || | ||| |||||||| || || |||| ||| ||| ||||| | Sbjct 32412 CGCAGTACCAGGTGAAGCGTGGACTCTTTCTGGATGCTGTAGTCGGCCAGGGTGCGGCCA 32471 Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || ||||| || || | | |||| || |||||||| |||||||| |||||||||||| Sbjct 32472 TCCTCAAGCTGCTTGCCCGTGAAGATTAAGCGCTGCTGGTCGGGAGGGATGCCCTCCTTG 32531 Query 127019 TCC 127021 ||| Sbjct 32532 TCC 32534 >seq12 Length=84225 Score = 91.5 bits (100), Expect = 1e-13 Identities = 91/118 (77%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 126904 CACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963 |||||| || | || ||||| ||||| || ||||| || ||| ||||| ||| || Sbjct 63 CACCAAGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCAGCCAGGGTGCGCCCATCCTC 122 Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCC 127021 ||||| || || || |||||| |||||||| |||||||| ||||||||||||||| Sbjct 123 AAGCTGCTTGCCCGCAAAGATCAGACGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCC 180 >seq1162 Length=13745 Score = 87.8 bits (96), Expect = 2e-12 Identities = 90/118 (76%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 126904 CACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963 ||||| || | || ||||| ||||| || ||||| || ||| ||||| ||| || Sbjct 13623 CACCAGGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCAGCCAGGGTGCGCCCATCCTC 13682 Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCC 127021 ||||| || || || |||||| |||||||| |||||||| ||||||||||||||| Sbjct 13683 AAGCTGCTTGCCCGCAAAGATCAGACGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCC 13740 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475453255863760