Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq7728 131 2e-25 seq12 109 5e-19 seq1176 104 2e-17 seq1162 104 2e-17 seq907 102 8e-17 seq585 93.3 4e-14 seq1233 87.8 2e-12 >seq7728 Length=1087 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || |||||||| ||||||||| | || || ||| ||| | Sbjct 48 ATGCAGATCTTCGTCAAGACCCTGACGGGCAAGACCATCACCCTAGATGTTGAGCCCAGC 107 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || |||| |||| ||||| || || || ||| | || || Sbjct 108 GACACAATCGAGAATGTGAAGCAAAAGATCCAGGACAAGGAAGGGATCCCCCCTGATCAG 167 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| ||||| | |||||||| |||||||| |||| ||||| || ||||||||| Sbjct 168 CAGCGCCTCATCTTTGCGGGCAAGCAGCTGGAGGACGGCCGCACGCTTTCGGACTACAAC 227 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 || || ||||| | || |||| |||| ||||| || ||||||| Sbjct 228 ATTCAGAAGGAGTCCACATTGCACCTGGTTCTGCGCCTGCGAGGCGG 274 >seq12 Length=84225 Score = 109 bits (120), Expect = 5e-19 Identities = 105/135 (78%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396 ||||| ||||| ||||| ||||||| ||||| || || | |||||||| ||||| || Sbjct 179 GACAAGGAGGGCATTCCTCCCGACCAGCAGCGTCTGATCTTTGCGGGCAAGCAGCTTGAG 120 Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456 || | ||||||||| |||||||||||||||||||| | || || || |||||||| Sbjct 119 GATGGGCGCACCCTGGCTGACTACAACATCCAAAAGGAGTCCACCCTCCACTTGGTGCTT 60 Query 38457 CGTTTGAGAGGCGGC 38471 || || | |||||| Sbjct 59 CGCCTGCGTGGCGGC 45 >seq1176 Length=13603 Score = 104 bits (114), Expect = 2e-17 Identities = 104/135 (77%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396 ||||| ||||| ||||| | ||||| ||||| || |||| |||||||| |||||||| Sbjct 12628 GACAAGGAGGGCATTCCTCCTGACCAGCAGCGCCTGATTTTTGCGGGCAAGCAGCTGGAG 12569 Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456 || | |||||||| |||||||||||||| ||||| | || || || |||||||| Sbjct 12568 GATGGCCGCACCCTGGCTGACTACAACATCCAGAAGGAGTCCACCCTCCACCTGGTGCTG 12509 Query 38457 CGTTTGAGAGGCGGC 38471 || || | |||||| Sbjct 12508 CGCCTGCGTGGCGGC 12494 Score = 104 bits (114), Expect = 2e-17 Identities = 104/135 (77%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396 ||||| ||||| || ||| | ||||| ||||| || |||| |||||||| |||||||| Sbjct 13387 GACAAGGAGGGCATCCCCCCTGACCAGCAGCGCCTGATTTTTGCGGGCAAGCAGCTGGAG 13328 Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456 || | |||||||| |||||||||||||| ||||| | || || || |||||||| Sbjct 13327 GATGGCCGCACCCTGGCTGACTACAACATCCAGAAGGAGTCCACCCTCCACCTGGTGCTG 13268 Query 38457 CGTTTGAGAGGCGGC 38471 || || | |||||| Sbjct 13267 CGCCTGCGCGGCGGC 13253 >seq1162 Length=13745 Score = 104 bits (114), Expect = 2e-17 Identities = 104/135 (77%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396 ||||| ||||| ||||| ||||||| ||||| || || | |||||||| ||||| || Sbjct 13739 GACAAGGAGGGCATTCCTCCCGACCAGCAGCGTCTGATCTTTGCGGGCAAGCAGCTTGAG 13680 Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456 || | ||||||||| |||||||||||||||||||| | || || || ||||||| Sbjct 13679 GATGGGCGCACCCTGGCTGACTACAACATCCAAAAGGAGTCCACCCTCCACCTGGTGCTT 13620 Query 38457 CGTTTGAGAGGCGGC 38471 || || | |||||| Sbjct 13619 CGCCTGCGTGGCGGC 13605 >seq907 Length=16333 Score = 102 bits (112), Expect = 8e-17 Identities = 122/166 (73%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 132884 TGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGC 132943 || ||| || ||| |||||||| |||| ||||||||||| ||||| ||||| Sbjct 11371 TGTACAGCAGGCAGGCAAAGTCTGTGTGCAGGCCCTCGTCCCGACTGATGAGCTCGTTTG 11312 Query 132944 TGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGC 133003 |||||| | |||||||||||| ||||| || |||||||| || |||| | ||| | Sbjct 11311 AGAAAGTGAGGCCGGGCATGAGTCCGCGCTTCTTGAGCCAGAAGATGGAGCAGAAGGACC 11252 Query 133004 CCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTC 133049 | || ||||||| |||||| || ||| || || | ||| ||||| Sbjct 11251 CGGAGAAGAAGATGCCCTCCACACACGCAAACGCAATCAGACGCTC 11206 >seq585 Length=20866 Score = 93.3 bits (102), Expect = 4e-14 Identities = 96/126 (76%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 38346 GGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGC 38405 |||||||| | ||||| ||||| || |||| |||||||| |||||||| || | ||| Sbjct 795 GGAATTCCTCCTGACCAGCAGCGCCTGATTTTTGCGGGCAAGCAGCTGGAGGATGGCCGC 736 Query 38406 ACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGA 38465 ||||| |||||||||||||| ||||| | || || || |||||||||| || | Sbjct 735 ACCCTGGCTGACTACAACATCCAGAAGGAGTCCACCCTCCACCTGGTGCTGCGCCTGCGC 676 Query 38466 GGCGGC 38471 || ||| Sbjct 675 GGTGGC 670 >seq1233 Length=13172 Score = 87.8 bits (96), Expect = 2e-12 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 38359 ACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 38418 |||| ||||| || || | |||||||| |||||||| |||| |||||||| ||| | Sbjct 13172 ACCAGCAGCGCCTGATCTTTGCGGGCAAGCAGCTGGAGGACGGCCGCACCCTTGCCGATT 13113 Query 38419 ACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 |||||||||| || || | |||||||| |||||||||| || | || ||| Sbjct 13112 ACAACATCCAGAAAGAGTCCACGCTGCACCTGGTGCTGCGCCTGCGCGGTGGC 13060 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500122788972160