Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq1826 134 2e-26 seq6129 91.5 2e-13 seq2168 91.5 2e-13 seq5237 86.0 8e-12 >seq1826 Length=9519 Score = 134 bits (148), Expect = 2e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 7202 TTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCA 7261 ||||| ||||||||||| ||||| ||||| | |||||| || |||||||| || || Sbjct 3032 TTTTCCACAGGTTCCATGCATTTGCGGAAAAGGTCCATGTTGAGCTCCTCAAATCGAGCG 2973 Query 7262 CGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTT 7321 || |||||||| | |||||| || | ||| |||||||| || ||||| ||||| | || | Sbjct 2972 CGCGTAATGGAGGAATAGAAGTCGATGCCCTCGTATAAAGAGTCAATCTCAATAGATGCT 2913 Query 7322 TGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGG 7381 || | || ||||| | || || || || |||||||| | || || | || || ||| Sbjct 2912 TGGGTCGAGGAAGAAAGAGTGCGTTTGGCACGCTCACAAGAGGTACGCAGGCGCCGGAGG 2853 Query 7382 GCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTC 7428 ||||| ||||| | ||| ||||| || || || || ||||| Sbjct 2852 GCACGAGGGTTGGAGCTAATGTCTTTGCGGTGCTTTCGCTTGAACTC 2806 Score = 114 bits (126), Expect = 2e-20 Identities = 147/201 (73%), Gaps = 4/201 (2%) Strand=Plus/Minus Query 7916 TGTTGG-TCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGG 7974 |||||| ||||||||||| | || || || ||||| |||||||| || ||||| |||| Sbjct 1282 TGTTGGGTCCGAAAACTTGCGCCCAATGAGCCGCTTGGCATCAAACACAGTGTTGATGGG 1223 Query 7975 GTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAA 8034 ||||||||| ||||||||| || || ||||| || | || || | | || || || Sbjct 1222 GTTCATGGCCACTTGGTTCTTGGCAGCATCCCCAATCAAGCGCTC---AGTGTCGGTGAA 1166 Query 8035 CGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTC 8094 || || ||||| || || || || || || || || || | ||| ||||| ||||| || Sbjct 1165 AGCCACATACGAGGGCGTAGTGCGGTTTCCCTGCTCATTGGGAATGATTTCCACGCGATC 1106 Query 8095 GTTTTGCCAGACGCCGACGCA 8115 | ||||| | ||| || || Sbjct 1105 ATGCTGCCACAGGCCCACACA 1085 >seq6129 Length=1796 Score = 91.5 bits (100), Expect = 2e-13 Identities = 141/200 (71%), Gaps = 5/200 (3%) Strand=Plus/Minus Query 7538 ACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGT-CGTCTTTGTT 7596 |||||||| ||||| || |||||||| || | | | |||| || | | |||| Sbjct 781 ACATCAAAGGTACCCCCTCCCAGGTCGAACACCAAGATGTTCTGCTCCTTCCCCTTT--- 725 Query 7597 CTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTT 7656 || ||||||||||| || || || || ||||| || || || |||||||| | | Sbjct 724 -TTGTCGAGACCGTATGCAATGGCAGCGGCCGTCGGCTCGTTGATAATACGCTGCACGGA 666 Query 7657 CAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGC 7716 || || | ||| || | ||||| ||||| || ||||| || | ||| || |||||||| Sbjct 665 CATCCCCGAAATCGTACCGGCATCCTTCGTTGCCTGTCGCTGAGCATCATTGAAGTAGGC 606 Query 7717 CGGGACCGTTACGACCGCGT 7736 || || || ||||| |||| Sbjct 605 GGGCACGGTGACGACAGCGT 586 >seq2168 Length=8098 Score = 91.5 bits (100), Expect = 2e-13 Identities = 146/209 (70%), Gaps = 3/209 (1%) Strand=Plus/Plus Query 7535 GAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTG 7594 || || || ||||| || ||||| ||||| || | ||| | | | ||||| || ||| Sbjct 3784 GACACGTCGAACGTGCCGCCACCGAGGTCGAAGACGAGGATGAGC---TCGTCCTCCTTG 3840 Query 7595 TTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAG 7654 ||| ||||| ||||| |||| ||||| || || || || || || || || || | Sbjct 3841 CCCTTGTCGAGGCCGTAGGCGAGGGCCGCGGCGGTCGGCTCGTTGATGATGCGCAGCACG 3900 Query 7655 TTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAG 7714 || ||||| || || | || || ||||| || || || | | ||||| |||||| Sbjct 3901 TTGAGGCCCGCGATCTCACCGGCCTCCTTCGTGGCCTGGCGCTCGGCGTCGTTGAAGTAG 3960 Query 7715 GCCGGGACCGTTACGACCGCGTCCGTGAC 7743 || || || || | ||||||||||| ||| Sbjct 3961 GCGGGCACGGTGATGACCGCGTCCGAGAC 3989 >seq5237 Length=2485 Score = 86.0 bits (94), Expect = 8e-12 Identities = 135/188 (72%), Gaps = 4/188 (2%) Strand=Plus/Minus Query 7597 CTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTT 7656 ||| ||||||||||| |||| || || ||||| || || || || || || || || || Sbjct 1245 CTTGTCGAGACCGTAGGCGAGCGCGGCAGCCGTCGGCTCGTTGATGATGCGCAG-CACTT 1187 Query 7657 C-AGGCCAGCAATAGTTGCC-GCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAG 7714 | ||||| || || ||||| ||||| || || || || ||||||| ||||| || || Sbjct 1186 CGAGGCCGGCGAT-CTTGCCGGCATCCTTGGTGGCCTGACGTTGCGCGTCGTTGAAATAA 1128 Query 7715 GCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCT 7774 || || || || | ||| || | ||| |||| ||||||| || || ||| | || Sbjct 1127 GCGGGAACGGTGATGACGGCCTGATCGACCTTCTGGCCGAGATGCGCCTCAGCGGTCTCC 1068 Query 7775 TTCATTTT 7782 ||||| || Sbjct 1067 TTCATCTT 1060 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635069294659160