Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_015279.1 Length=190789 Score E Sequences producing significant alignments: (Bits) Value seq1741 242 5e-59 seq5 84.2 3e-11 >seq1741 Length=9891 Score = 242 bits (268), Expect = 5e-59 Identities = 298/407 (73%), Gaps = 0/407 (0%) Strand=Plus/Plus Query 182030 ACCGTGGAGAATACTCTGTATCAAGACGGTGACCAAGCAAATACTTTCAAAGCATTCGAT 182089 || || || ||||| || | | |||| ||||| ||||| |||||| || || | Sbjct 4 ACTGTAGAAAATACACTTTTTGAAGATGGTGATGGTGCAAACACTTTCCGTGCGTTTAAC 63 Query 182090 TCAACTCAAGAAGAAGAAACCTATTCAATGGTTACAGCGAACCGCTTCTGGTCTCAGATC 182149 ||||||||| |||||||| ||||||||||| || || ||||| |||||||| || || Sbjct 64 CCAACTCAAGCTGAAGAAACATATTCAATGGTAACCGCAAACCGTTTCTGGTCACAAATT 123 Query 182150 TTCGGTATTGCGTTTAGCAATAAGAGGTGGTTGCATTTCTTTATGCTCTTTGTTCCTGTT 182209 || ||| | || ||| || || | ||||| || || |||||| | |||||||| || Sbjct 124 TTTGGTGTAGCTTTTTCAAACAAACGTTGGTTACACTTTTTTATGTTATTTGTTCCAGTA 183 Query 182210 ATGGGTCTTTGGACAAGTTCCATCGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTTAT 182269 | |||||||||| ||| | || ||| || | ||| | ||| | ||| | ||||||||| Sbjct 184 ACTGGTCTTTGGATGAGTGCTATTGGTGTTGTAGGTTTAGCTTTAAACTTACGTGCTTAT 243 Query 182270 GACTTTGTATCCCAAGAAATCAGAGCATCAGAAGACCCAGAGTTCGAGACGTTCTACACA 182329 || || || || |||||||| | || | ||||| || |||||||| || ||||| ||| Sbjct 244 GATTTCGTTTCACAAGAAATTCGCGCTGCGGAAGATCCTGAGTTCGAAACTTTCTATACA 303 Query 182330 AAGAACATTCTCTTGAATGAAGGTCTGCGTGCATGGTTAGCACCAGTCGATCAACCACAT 182389 || || ||||| || || |||||| | ||||| ||| | || | ||||| || ||| Sbjct 304 AAAAATATTCTTTTAAACGAAGGTATTCGTGCTTGGATGGCTGCTCAAGATCAGCCTCAT 363 Query 182390 GAGAACTTTGTGTTCCCTGAGGAAGTATTACCCAGAGGTAACGCACT 182436 || || |||| ||||||||||| || ||||| | || ||||| || Sbjct 364 GAAAAACTTGTATTCCCTGAGGAGGTTTTACCACGTGGAAACGCTCT 410 >seq5 Length=148305 Score = 84.2 bits (92), Expect = 3e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 142214 CGGGGTGTAGCTCAGTTTGGTAGAGCACTCGCTTTGGGAGCGAGTGGCCGTAGGTTCAAA 142273 ||||| ||||||||| |||||||||| | ||||||||||||| | | || ||||||||| Sbjct 79772 CGGGGCGTAGCTCAGCTTGGTAGAGCGCCCGCTTTGGGAGCGGGAAGTCGCAGGTTCAAA 79713 Query 142274 TCCTATCACCCCGA 142287 |||| || |||||| Sbjct 79712 TCCTGTCGCCCCGA 79699 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 610335767949960