Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq1741 196 6e-45 >seq1741 Length=9891 Score = 196 bits (216), Expect = 6e-45 Identities = 267/370 (72%), Gaps = 2/370 (1%) Strand=Plus/Plus Query 173620 ACTTTCAGAGCATTTGATCCTACACAGGAAGAAGAAACTTATAGTATGATTACAGCGAAC 173679 |||||| | || ||| | || || || | |||||||| ||| ||| | || || ||| Sbjct 46 ACTTTCCGTGCGTTTAACCCAACTCAAGCTGAAGAAACATATTCAATGGTAACCGCAAAC 105 Query 173680 AGATTCTGGTCACAGATATTTGGTATCGCATTTTCAAACAAAAGATTTTTACACTTCCTC 173739 | ||||||||||| || |||||| | || |||||||||||| | | |||||||| | Sbjct 106 CGTTTCTGGTCACAAATTTTTGGTGTAGCTTTTTCAAACAAACGTTGGTTACACTTTTTT 165 Query 173740 ATGTTGTTCGTACCTGTCATGGGTATGTGGACATCATCCATAGGTATCGTAGGTCTTGCA 173799 ||||| || || || || | ||| | |||| | || ||| | |||||| | || Sbjct 166 ATGTTATTTGTTCCAGTAACTGGTCTTTGGATGAGTGCTATTGGTGTTGTAGGTTTAGC- 224 Query 173800 CTTAACCTTA-GAGCATACGACTTTGTATCTCAAGAGATAAGAGCAGCAGAAGATCCAGA 173858 |||| |||| | || || || || || || ||||| || | || || |||||||| || Sbjct 225 TTTAAACTTACGTGCTTATGATTTCGTTTCACAAGAAATTCGCGCTGCGGAAGATCCTGA 284 Query 173859 GTTCGAGACTTTCTACACTAAGAATATACTTCTTAATGAAGGTATGAGAGCATGGATGTC 173918 |||||| |||||||| || || ||||| ||| | || |||||||| | || |||||| | Sbjct 285 GTTCGAAACTTTCTATACAAAAAATATTCTTTTAAACGAAGGTATTCGTGCTTGGATGGC 344 Query 173919 ATCTGTAGATCAACCACATGAGAACTTCGTATTTCCAGAAGAAGTGTTACCAAGAGGTAA 173978 || |||||| || ||||| || | ||||| || || || || |||||| | || || Sbjct 345 TGCTCAAGATCAGCCTCATGAAAAACTTGTATTCCCTGAGGAGGTTTTACCACGTGGAAA 404 Query 173979 CGCACTTTAA 173988 ||| |||||| Sbjct 405 CGCTCTTTAA 414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587992402230640