Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_015286.1 Length=175230 Score E Sequences producing significant alignments: (Bits) Value seq1741 251 8e-62 seq224 107 2e-18 >seq1741 Length=9891 Score = 251 bits (278), Expect = 8e-62 Identities = 300/407 (74%), Gaps = 0/407 (0%) Strand=Plus/Plus Query 169089 ACAGTAGAGAATACTCTGTATCAAGATGGTGAACAAGCAAATACTTTCAAAGCATTTGAC 169148 || ||||| ||||| || | | |||||||||| ||||| |||||| || ||| || Sbjct 4 ACTGTAGAAAATACACTTTTTGAAGATGGTGATGGTGCAAACACTTTCCGTGCGTTTAAC 63 Query 169149 AGCACTCAGGAAGAGGAGACCTATTCAATGGTTACTGCAAACCGTTTCTGGTCTCAGATC 169208 ||||| | || || || ||||||||||| || ||||||||||||||||| || || Sbjct 64 CCAACTCAAGCTGAAGAAACATATTCAATGGTAACCGCAAACCGTTTCTGGTCACAAATT 123 Query 169209 TTTGGTATTGCGTTCAGTAATAAGAGGTGGTTGCATTTCTTTATGCTGTTTGTTCCTGTT 169268 |||||| | || || || || | ||||| || || |||||| | |||||||| || Sbjct 124 TTTGGTGTAGCTTTTTCAAACAAACGTTGGTTACACTTTTTTATGTTATTTGTTCCAGTA 183 Query 169269 ATGGGTCTTTGGACAAGTTCCATCGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTTAT 169328 | |||||||||| ||| | || ||| || | ||| | ||| | ||| | ||||||||| Sbjct 184 ACTGGTCTTTGGATGAGTGCTATTGGTGTTGTAGGTTTAGCTTTAAACTTACGTGCTTAT 243 Query 169329 GACTTTGTTTCCCAAGAGATCAGAGCAGCAGAAGATCCAGAGTTTGAGACGTTCTACACC 169388 || || ||||| ||||| || | || || |||||||| ||||| || || ||||| || Sbjct 244 GATTTCGTTTCACAAGAAATTCGCGCTGCGGAAGATCCTGAGTTCGAAACTTTCTATACA 303 Query 169389 AAGAACATCCTCTTGAACGAAGGTCTTCGTGCATGGTTAGCACCTATTGATCAACCTCAT 169448 || || || || || ||||||||| ||||||| ||| | || || ||||| |||||| Sbjct 304 AAAAATATTCTTTTAAACGAAGGTATTCGTGCTTGGATGGCTGCTCAAGATCAGCCTCAT 363 Query 169449 GAGAACTTTGTGTTCCCTGAGGAAGTACTTCCCCGAGGTAATGCCCT 169495 || || |||| ||||||||||| || | || || || || || || Sbjct 364 GAAAAACTTGTATTCCCTGAGGAGGTTTTACCACGTGGAAACGCTCT 410 >seq224 Length=33074 Score = 107 bits (118), Expect = 2e-18 Identities = 68/74 (92%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 22476 GGGGAATTAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCAGGAGTTCGAGT 22535 |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| | Sbjct 10323 GGGGCCTTAGCTCAGCTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCAGGAGTTCGAAT 10264 Query 22536 CTCCTATTCTCCAC 22549 |||||| |||||| Sbjct 10263 CTCCTAGGCTCCAC 10250 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 560551946207600