Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq1162 104 5e-17 seq12 98.7 2e-15 seq73 93.3 9e-14 seq1176 89.7 1e-12 >seq1162 Length=13745 Score = 104 bits (114), Expect = 5e-17 Identities = 96/122 (79%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || |||||||| ||||| || ||||| || || || || | |||||| || Sbjct 13624 ACCAGGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCAGCCAGGGTGCGCCCATCCTCA 13683 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || || ||||| || || || ||||| ||||||||||| || ||||| || Sbjct 13684 AGCTGCTTGCCCGCAAAGATCAGACGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCCTGC 13743 Query 195052 AT 195053 || Sbjct 13744 AT 13745 >seq12 Length=84225 Score = 98.7 bits (108), Expect = 2e-15 Identities = 92/117 (79%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| || |||||||| ||||| || ||||| || || || || | |||||| || ||||| Sbjct 69 GTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCAGCCAGGGTGCGCCCATCCTCAAGCTG 128 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAAT 195053 ||| || || ||||| || || || ||||| ||||||||||| || ||||| || || Sbjct 129 CTTGCCCGCAAAGATCAGACGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCCTGCAT 185 >seq73 Length=47289 Score = 93.3 bits (102), Expect = 9e-14 Identities = 92/119 (77%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || |||||||| ||||||||||| || || |||| ||||| || || | ||||| || Sbjct 32418 ACCAGGTGAAGCGTGGACTCTTTCTGGATGCTGTAGTCGGCCAGGGTGCGGCCATCCTCA 32477 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 |||||||| || | |||||| | || || ||||| ||||| ||||| || ||||| || Sbjct 32478 AGCTGCTTGCCCGTGAAGATTAAGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTG 32536 >seq1176 Length=13603 Score = 89.7 bits (98), Expect = 1e-12 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || |||||||| || || || ||||| || || || || | ||||| || Sbjct 12513 ACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGGCCATCCTCC 12572 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 |||||||| || || || || || || || ||||| ||||||||||| || ||||| || Sbjct 12573 AGCTGCTTGCCCGCAAAAATCAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTG 12631 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109367892351233