Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq7728 129 4e-25 >seq7728 Length=1087 Score = 129 bits (142), Expect = 4e-25 Identities = 172/235 (73%), Gaps = 7/235 (3%) Strand=Plus/Minus Query 34752 TTTCCTCC-CCTC--AACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAG 34808 |||||||| |||| | | || ||||| ||| | |||| || ||||||||||| ||| Sbjct 280 TTTCCTCCGCCTCGCAGGCGCAGAACCAGGTGCAATGTGGACTCCTTCTGAATGTTGTAG 221 Query 34809 TCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCT 34868 |||||||| | || | || |||||||| || || ||||| || || || ||||| || Sbjct 220 TCCGAAAGCGTGCGGCCGTCCTCCAGCTGCTTGCCCGCAAAGATGAGGCGCTGCTGATCA 161 Query 34869 TGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT--ATCGATTCACCGG 34926 | || | ||| |||||||| ||||| || || || || || || | || | || Sbjct 160 GGGGGGATCCCTTCCTTGTCCTGGATCTTTTGCTTCAC--ATTCTCGATTGTGTCGCTGG 103 Query 34927 CCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 ||||||||| | ||| ||||| || ||||| || ||||| || ||||||||||| Sbjct 102 GCTCAACATCTAGGGTGATGGTCTTGCCCGTCAGGGTCTTGACGAAGATCTGCAT 48 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324601952180472