Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_015938.1 Length=89916 Score E Sequences producing significant alignments: (Bits) Value seq180 98.7 6e-16 >seq180 Length=35712 Score = 98.7 bits (108), Expect = 6e-16 Identities = 174/254 (69%), Gaps = 0/254 (0%) Strand=Plus/Plus Query 72917 GTCGCCTTCATCGCCCAACCCAGAGTGTCACGAGTGACATACTGATAGGTGAACGAGCCG 72976 |||||||| | |||||| || | |||| || || | || || |||||| | |||||| Sbjct 28986 GTCGCCTTGAGCGCCCAGCCGAAGCTGTCGCGGGTCAGGTATTGGTAGGTGTAGGAGCCG 29045 Query 72977 ATACCCAGCACGACGTTGCTAGAGGCAAAGCCCTTAGCTTTCAGACGCTGGAAGATTTCC 73036 || ||||| || ||||||| || ||||| ||||| || || ||| | ||| || Sbjct 29046 ATGCCCAGGACCACGTTGCCGGACGCAAACCCCTTTCTTTCCAACCGCACCAGGATGTCG 29105 Query 73037 AGTTGGCGAACCAGGGAGATTGAATCGCCGTAAATCAGGCCGATGTGGTCGTCAAGAACT 73096 | || |||| | ||| ||||||||||| |||||||||| ||| ||| || | Sbjct 29106 CGGCCACGCGCCAGCGTGATGGAATCGCCGTAGATCAGGCCGACGTGCGGGTCCAGCAGC 29165 Query 73097 TTGTAGCCCTTGTTGTTGATATGACCACCAAAGGTGTCCCAGAGAACCTGAATAGCACCT 73156 |||||||| | | | | || || ||| ||||||| || ||| | || ||| Sbjct 29166 TTGTAGCCGCGCTCGGTCACCACGCCGCCGAAGATGTCCCACAGGCACTGCACCGCGCCT 29225 Query 73157 TTAACTTCTGCTTC 73170 || ||||| || || Sbjct 29226 TTGACTTCGGCCTC 29239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 287578361881203