Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_016566.1 Length=44077 Score E Sequences producing significant alignments: (Bits) Value seq2091 113 1e-20 >seq2091 Length=8365 Score = 113 bits (124), Expect = 1e-20 Identities = 331/504 (66%), Gaps = 27/504 (5%) Strand=Plus/Minus Query 27012 TCGTCCAGTGTCCCGCGAGCCTGGATAATGTAGACGAATACTGGTCGAGGGTGTCCGGCT 27071 ||||| | || |||| ||| |||| || || ||| || || || ||| ||||| Sbjct 5827 TCGTCGACCGTGTCGCGCGCCAGGATGTAGTGGATGAAGACGGGCCGGTCGTGGCCGGCC 5768 Query 27072 TGCATCTGGCGAACCGGCCCGATACGTTCAACGATCTGCGAAAAGTGCTCAAAGTTCCAG 27131 ||||||||||| || ||||| ||||| | ||||||| | ||| | ||||||| Sbjct 5767 TGCATCTGGCGCGTTGGTCCGATGCGTTCGATGATCTGCTGGTGTTCCTCCAGGTTCCAG 5708 Query 27132 GTATCGGAGAAGATTGCCAGG-TGATGTCCGCCGTCCTGCAAGTTAAGGCCGTGGCCTGC 27190 | || ||||| ||||| || || ||||||||||| | ||| ||||||||||| || Sbjct 5707 TTCACGCTGAAGAACACCAGGATGTTG-CCGCCGTCCTGTAGGTTCAGGCCGTGGCCGGC 5649 Query 27191 CGATGCCGGGTGTGCAAACATGATGGGGATCTCGCCCCTGTTCCACGCTTCCATATCCTT 27250 |||||||| || |||| | |||||||| ||| |||||| | | | | | Sbjct 5648 GCTGGCCGGGTGGGCGAACAGCACGGGGATCTTGCCGGCGTTCCA--GTCGCGCAGCGT- 5592 Query 27251 ATTGCCCTGCTTACCCTTACCCAACGCGACGCCGTGCGGAAATTTCTTCTTAAGACGTGC 27310 |||| | |||| | | | | ||| | || || ||| || || || Sbjct 5591 ------CTGCGGATCCTTGTCGAGCTGGCGGCCCTTGGGGAACGCCTTAAGCAGGCGCGC 5538 Query 27311 CAGATCATGCTTGTACTGATACGCAACGAGCAACGGCGCGCCGTTCAACTCCTCCACGAT 27370 ||| || |||| | || || || || |||| |||| |||| | ||||| | | Sbjct 5537 CAGGTCGGACTTGAAGTGGTAGGCCACCAGCACCGGCATGCCGGCCGCTTCCTCAATG-- 5480 Query 27371 ACTT--TCCAGCGCGTCCAGCTTCGCGTCGTGAATCTTCACCCACTCGTCGGTCCGTTCG 27428 |||| |||||||| | |||||| ||||||| | || ||||| | ||| | Sbjct 5479 ACTTCGTCCAGCGCCTGCAGCTTGACGTCGTGCACCTCGGCCCAC-------TGCGT--G 5429 Query 27429 CCGTCTTCGTCCACCTTATACACAGCGCCGGATGCAAGCTGAAGGCACTTAATTGTCTTC 27488 ||||| ||| | || || | |||||| || ||||| | |||||| || ||||| Sbjct 5428 CCGTCCTCGCCTAC---GTAGGCGGCGCCGTTGGCCAGCTGCAAGCACTTCATCGTCTTG 5372 Query 27489 GCCGCGGCGTTCGCCGCTTCCACT 27512 ||||| ||||| ||| || ||| Sbjct 5371 GCCGCCGCGTTGAACGCCTCGACT 5348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 140911413817482