Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_016762.1 Length=49135 Score E Sequences producing significant alignments: (Bits) Value seq240 172 2e-38 seq1120 131 5e-26 >seq240 Length=32197 Score = 172 bits (190), Expect = 2e-38 Identities = 160/202 (79%), Gaps = 1/202 (0%) Strand=Plus/Plus Query 21314 CCCG-TGATCGTGCTGTCGCAGCTCAACCGCTCCCTGGAGCAGCGGCCGAACAAGCGACC 21372 |||| |||||| |||||||||||| ||||| |||||||||||| || |||||||| || Sbjct 9007 CCCGCTGATCGCGCTGTCGCAGCTGAACCGAAGCCTGGAGCAGCGTCCCAACAAGCGTCC 9066 Query 21373 GATGATGTCGGACCTGCGCGAGTCCGGGGCGATCGAGCAGGACGCCGATGTGATCATGTT 21432 ||||| ||||||||||| || || || ||||| ||||||||||| |||||| |||| Sbjct 9067 CGTGATGAGCGACCTGCGCGAATCGGGCGCCATCGAACAGGACGCCGACGTGATCCTGTT 9126 Query 21433 CGTGTACCGCGACGAGGTCTACCACCCGGATACCCAGTACCGCGGCGTGGCTGAGTTGAT 21492 | | |||||||||||||||||| |||| ||| | | | || ||| || ||| | || Sbjct 9127 CATCTACCGCGACGAGGTCTACAACCCCGATTCGCCGGACAAGGGCACTGCCGAGATCAT 9186 Query 21493 CATCGCGAAGCACCGCAACGGC 21514 ||||| ||||| || |||||| Sbjct 9187 CATCGGCAAGCAGCGTAACGGC 9208 >seq1120 Length=14217 Score = 131 bits (144), Expect = 5e-26 Identities = 217/308 (70%), Gaps = 9/308 (3%) Strand=Plus/Plus Query 21258 AGGACGTCAGCGACATGTCCCGCCAGTGCAAGCTGCTGGCGATGGAGCTTGGTATCCCCG 21317 |||| |||||||| | || || | |||||| ||||||| |||||| | || | Sbjct 6426 AGGAGGTCAGCGAGTTCTCGCGGGCGCTCAAGCTCCTGGCGAAGGAGCTGCAGGTGCCGG 6485 Query 21318 TGATCGTGCTGTCGCAGCTCAACC--GCTCCCTGGAGCAGCGGCCGAACAAGCGACCGAT 21375 | |||| ||||||||||| |||| | | || |||||||| | | ||||||| || Sbjct 6486 TCATCGCACTGTCGCAGCTGAACCGTGGTTCC--GAGCAGCGCCAGGACAAGCGTCCCCA 6543 Query 21376 GATGTCGGACCTGCGCGAGTCCGGGGCGATCGAGCAGGACGCCGATGTGATCATGTTCGT 21435 | || |||||||| || || || | ||||||||||||||||| || | || | | Sbjct 6544 GGTGAGCGACCTGCGTGAATCAGGCTCCATCGAGCAGGACGCCGACATGGTGATCCTGCT 6603 Query 21436 GTACCGCGACGAGGTCTACCACCCGGATACCCAGTACCGCGGCGTGGCTGAGTTGATCAT 21495 | |||||||| |||||| || ||| |||| || |||| ||| || | ||| | Sbjct 6604 GCACCGCGACTCCGTCTACGACAAGGACACCC---GCCCGGGCGAGGCGGACCTCATCGT 6660 Query 21496 CGCGAAGCACCGCAACGGCGAGCCAAGCACTGTTCG-GTGCGCGTTCCTGGGTAAGTACT 21554 ||| ||||||||||||||| | | || | ||| | |||||||| |||| | |||| Sbjct 6661 CGCCAAGCACCGCAACGGCCCGAC-CGCGACGCTCGAGATCGCGTTCCAGGGTCACTACT 6719 Query 21555 CGCGATTC 21562 |||| ||| Sbjct 6720 CGCGGTTC 6727 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157095476377686