Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_016765.1 Length=54024 Score E Sequences producing significant alignments: (Bits) Value seq240 95.1 4e-15 seq1120 82.4 3e-11 >seq240 Length=32197 Score = 95.1 bits (104), Expect = 4e-15 Identities = 94/122 (77%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 45545 CAGCTCAACCGAGGTTGCGAGTCTCGCCCCGACAAGCGTCCGGTCCTCAGCGACCTGCGC 45604 ||||| |||||| | ||| || ||| |||||||||| || | |||||||||||| Sbjct 9026 CAGCTGAACCGAAGCCTGGAGCAGCGTCCCAACAAGCGTCCCGTGATGAGCGACCTGCGC 9085 Query 45605 GAGTCCGGCGCCATTGAGCAAGACGCCGACATCGTCATGTTCGTGTACCGCGATGAAGTC 45664 || || |||||||| || || ||||||||| | || ||||| | |||||||| || ||| Sbjct 9086 GAATCGGGCGCCATCGAACAGGACGCCGACGTGATCCTGTTCATCTACCGCGACGAGGTC 9145 Query 45665 TA 45666 || Sbjct 9146 TA 9147 >seq1120 Length=14217 Score = 82.4 bits (90), Expect = 3e-11 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 45545 CAGCTCAACCGAGGTTGCGAGTCTCGCCCCGACAAGCGTCCGGTCCTCAGCGACCTGCGC 45604 ||||| ||||| |||| |||| |||| ||||||||||| | ||||||||||| Sbjct 6500 CAGCTGAACCGTGGTTCCGAGCAGCGCCAGGACAAGCGTCCCCAGGTGAGCGACCTGCGT 6559 Query 45605 GAGTCCGGCGCCATTGAGCAAGACGCCGACATCGTCATGTTCGTGTACCGCGA 45657 || || ||| |||| ||||| ||||||||||| || || | || ||||||| Sbjct 6560 GAATCAGGCTCCATCGAGCAGGACGCCGACATGGTGATCCTGCTGCACCGCGA 6612 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 172738790307468