Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_016767.1 Length=60714 Score E Sequences producing significant alignments: (Bits) Value seq439 403 7e-108 seq4354 95.1 5e-15 >seq439 Length=24139 Score = 403 bits (446), Expect = 7e-108 Identities = 784/1152 (68%), Gaps = 18/1152 (2%) Strand=Plus/Plus Query 43894 CCAGCATGGCCCGCACGAACCTGTCCCATATCTCCATGGCCTCGCGCTTCTCGGGCATGT 43953 ||||||||| || ||||| ||||||| | ||||| | | |||||||| ||||||| Sbjct 22742 CCAGCATGGTGCGGGCGAACTTGTCCCAGCGCGCCATGCCAGCTCGCTTCTCTGGCATGT 22801 Query 43954 AGCTGTAGCGGTCATAGTGCCGCGAGCTGACGTCGTGCCGGCTATGGTTCTGAAGCCGGT 44013 || | ||||||| ||| | ||||| ||||| ||| | ||||||||||| || | Sbjct 22802 AGTTCCAGCGGTCGTAGCTCTTGGAGCTAACGTCCTGCAGCGCATGGTTCTGAATGCGAT 22861 Query 44014 CCCCTTATCTCCTGCGTCAGCCCGGCCTTGCCTGCCAGCGTTTTCCACGTCCGCCGCAGG 44073 | | || |||| || || || |||||||||| |||||| |||||||| ||||||| | Sbjct 22862 CGCGG-ATTTCCTTCGGCACGCCAGCCTTGCCTGACAGCGTCTTCCACGTTCGCCGCAAG 22920 Query 44074 TCGCGGTTCGTGATGTCCGGCAGCACGCCCCGGTCCCGTTGCCGCCAAAGGGCGGAATAG 44133 ||||| || || | | |||| | ||||| ||||| || || ||||| | || |||| Sbjct 22921 TCGCGATTGGTCACGACCGGGATGACGCCGCGGTCGCGCTGGCGCCACATAAAGGCATAG 22980 Query 44134 AGGGTGCCGTGACTGACGGGCTTCTCGGGATCCATCTGCGAGGGGAAGAACCAGCCGTGC 44193 || || || || |||||||||||| |||||| || ||||||||||||||| || || Sbjct 22981 AGCGTCCCATGGCTGACGGGCTTCGATGGATCCTTCGCCGAGGGGAAGAACCACCCATGT 23040 Query 44194 TCGTTCGTGCCGATTTCGTCCAGCAGCTCGATGGCGAGCGACGGCAGCGGGATCGTGTGA 44253 ||||||| || || || ||||| || | ||||| | |||| || ||| Sbjct 23041 TCGTTCGGCTTAATGGAATCGAGAAGCTCCGCCGCCAAGGACGGAACAGGGACCGCATGA 23100 Query 44254 GGCTTCCCGTTCTTCGTCTTTGACCAGTCGAGCAGCCCTTCAGCCTTGTCGTACTGGTCC 44313 ||||| | |||||| || |||||||||||||| | | ||| || |||| ||| Sbjct 23101 GGCTTGCTGTTCTTGGTTTTTGACCAGTCGAGAATTCGTTCGCGGGAATCCCACTGATCC 23160 Query 44314 CGGTGCAGGGCGGCAATTTCCTCCACGCGCTGCCCGGTGAGCATCAGCAGGCGCATGGCG 44373 ||| ||| || |||||||| || ||||| || ||||||||||| | | | ||| Sbjct 23161 TTGTGAAGGCGCGCGATTTCCTCGACCCGCTGGCCCGTGAGCATCAGGATCTGAACGGCC 23220 Query 44374 TCAAGGTACGGGCCATGGATGGGCCTGTCCGGGTTTCCCAGCCAGTCCCACATGCGGCAG 44433 || || || || | ||| ||| ||| | | ||||| ||| | || Sbjct 23221 CGCAGATAGGGCGGGTGCACCGGCACGTCGGGGCATTCGAGCCATCGCCAGAGCTGGACA 23280 Query 44434 TAGTCCGCCTCACTGAGCCAGCGCGTGCCAACCACCTTAGGCTCGGTGGGGATCGAGGCC 44493 | || | || ||||| || | || || ||||||||||| || ||||| ||| Sbjct 23281 AACTCATCTTCGTCCAGCCACCGGGACCCGACGACCTTAGGCTCAGTCGGGATACCTGCC 23340 Query 44494 GCCGGGTTGTGAATGAGCTTGAACCGGCGCGGGCTGCTGGAGCGGTAGTCCAGCTCCGAT 44553 ||||| |||| | || || |||||||| || || ||||| |||||||| Sbjct 23341 GCCGGATTGTAGACCAGTCGAAATCGGCGCGGCGACGTGTTTCGATAGTCGTGCTCCGAT 23400 Query 44554 TTCAGCCCCCACGCGAAGGCCGCCCGGATGTAGGAGCGAACGTGGTCCGCCATGGAGTTT 44613 |||| ||||| | | || || ||||||||| |||| |||||||||||||||| Sbjct 23401 TTCATTCCCCAGCTGTAAGCTGCGCGGATGTAGCAGCGGACGTGGTCCGCCATGGCAGGG 23460 Query 44614 TTGCCGCGCTCGAAGATGGGCCGGAGCACGTTCAGCACGTCCTCTGGCTCGATGTCGCGG 44673 || ||||| ||||| || |||||||| | | ||| || || |||||||| || ||| Sbjct 23461 GCCCCACGCTCAAAGATCGGGCGGAGCACCTCCGTCACCTCGTCCGGCTCGATCTCCCGG 23520 Query 44674 GCGAGGCGGTTCCGGCCGAGACCATCCGTGATTTTATCCAGCCCCTTCTTCG----CTTC 44729 || |||||||| || || ||| || | | || | ||| || |||| || |||| Sbjct 23521 GCAAGGCGGTTGCGCCCAAGAGTGTCGGCTACCTTGTTCAGTCCTTTCTCCGTTTCCTTC 23580 Query 44730 CACGA-AGCT--CATTTTCCCCTGAGCCTTCAGGTTATCAACGTAGGCGTCGAACAGGTC 44786 || || ||| | | | | ||||| ||| | |||||||| ||||| ||||| Sbjct 23581 CAGGACGGCTTACCTGCTTCTTTGAGC---GAGG----CGACGTAGGCTTCGAAAAGGTC 23633 Query 44787 GCCAACGGTGCCCGGCCGGCTGTCACCGCCTGCCACCTTGATCGAGGCACCCTTGTTGAT 44846 | | ||||| || ||||| || || | | |||||| |||||| | ||| Sbjct 23634 GGCGACGGTTCCGGGCCG---AGCATCGGTGACGATCTTGATGCTCCGACCCTTCTGGAT 23690 Query 44847 GGCCGTGGAGAAGTCGCGGCCGAACACCTCGCGGGCGCTCGCCAGCGTCATGTGGGGGTA 44906 || | ||||||||| ||| ||||| ||||| || |||| ||| || || Sbjct 23691 CGCGTCCGCGAAGTCGCGCTTGAAAACCTCTCGGGCTGCGGCGAGCGACATCGATGGATA 23750 Query 44907 GTCGCCCATCTTCGAGAGGGTGCGCTTATTGTCGCGCCACTGCTGCGCGTACCACGTCGT 44966 |||||| | |||| | | |||||| ||||||||| ||||| || ||| || Sbjct 23751 GTCGCCGAGTTTCGCCTTGATCCGCTTACCGTCGCGCCATTGCTGGGCCATCCATTCCGC 23810 Query 44967 CGTGACGCGGGTAGGCATGGGCTTGATGATGAGCACGAGGCGGCCGACGCCGCGCCCTTC 45026 | || || ||||||| ||| | || ||| || |||||||| |||||||| || || Sbjct 23811 CAGCACCCGCTTAGGCATCGGCCGCACGACGAGGACCAGGCGGCCCACGCCGCGTCCCTC 23870 Query 45027 ACCATCGGCCAG 45038 || |||||||| Sbjct 23871 GCCGTCGGCCAG 23882 >seq4354 Length=3390 Score = 95.1 bits (104), Expect = 5e-15 Identities = 126/175 (72%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 36097 CTGTTCGGCAAGGTCCGCACCGGCCGCGTCCGCGTCCTGTTCGGCTCCACGGCTAAGATG 36156 ||||||||| | || ||| ||||| |||||| ||||| |||| | ||| | |||| Sbjct 2173 CTGTTCGGCGACGTGCGCGCCGGCAAGGTCCGCTTCCTGATCGGGAGCTCGGACACGATG 2232 Query 36157 GGTGCCGGCATGAACGTGCAAAACAGGCTGGTGGCTCTCCACCACCTCGACGCACCATGG 36216 || ||||| | |||| ||| | || ||| | || |||||||||| || ||| Sbjct 2233 GGGACCGGCGTCAACGCGCAGCTGCGCCTCAAGGCCTTGCATCACCTCGACGTGCCGTGG 2292 Query 36217 CGCCCGTCTGACCTCGAACAGCGCGAGGGCCGCATCATCCGTCAGGGTAACGAGC 36271 | ||||| | |||| |||||||||||||||||| | || ||||| ||| ||| Sbjct 2293 CTGCCGTCGCAGATCGAGCAGCGCGAGGGCCGCATCGTGCGCCAGGGCAACCAGC 2347 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 194144756801688