Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq1025 102 7e-17 >seq1025 Length=15243 Score = 102 bits (112), Expect = 7e-17 Identities = 86/106 (81%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 30117 CTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATG 30176 ||||||||||||| | ||| ||||||||| |||||| ||||||| || || || || Sbjct 285 CTGATCCACCCCCTTGCCCCTGTAGTCTGCGTGCATGTCTGTGTACTGCGCACCAAAGTG 226 Query 30177 CCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTG 30222 | ||||||||| |||||||| || |||||||| ||||| |||||| Sbjct 225 GCGCCACTGGAAGCCGTACACGGGGCCCAGGTCACCCTCCTCCCTG 180 Score = 91.5 bits (100), Expect = 1e-13 Identities = 99/131 (76%), Gaps = 3/131 (2%) Strand=Plus/Minus Query 29878 ACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGC 29937 || || || |||||| | ||||| || ||||| |||||||| ||||| ||||| ||| Sbjct 1009 ACCTGTGCGATCATGCATGTGAGCAGCGAGTATGAAGCGATGTTGAAGGGCACCCCCAGC 950 Query 29938 CCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTCACGTAAAAC 29997 |||| ||| | ||||| |||||| | ||| || ||||| ||||| |||||||||| Sbjct 949 CCCAGGTCGCACGACCGCTGGTACATCTGGCAGCTCAGCTCGCCGTCCGCCACGTAAAAC 890 Query 29998 TG---ACACAT 30005 || |||||| Sbjct 889 TGCGCACACAT 879 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408577764764027