Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_017981.1 Length=49981 Score E Sequences producing significant alignments: (Bits) Value seq1581 107 6e-19 >seq1581 Length=10720 Score = 107 bits (118), Expect = 6e-19 Identities = 244/362 (67%), Gaps = 24/362 (7%) Strand=Plus/Minus Query 25915 CCGCCGCCGCTGCCGCCTTCTGGAGCCTTGCCGATCATCTGCATGGTTCCGCCAACGTTG 25974 || ||||||| |||| |||| | ||| ||| | ||||||||| | | || | Sbjct 10642 CCACCGCCGCCGCCGTCTTCGCG-GCC--GCCCAGCATCTGCAT----CTG-----GTCG 10595 Query 25975 ACCACAATTTCAGTGGTGTAGCGCTCAACGCCG---TCCTTTTC---CCACTTGCGGGTT 26028 | || ||||| ||| ||||||| ||| ||||| ||||| || |||||||||||| Sbjct 10594 GCGACGATTTCGGTGCTGTAGCGGTCAGCGCCGGTGTCCTTGTCTTGCCACTTGCGGGTC 10535 Query 26029 TTCAGTTGCCCCTCAATGTAAACCTGTGAACCTTTCTTCAGGTACTCGCCCGCGATCTCC 26088 ||||| | ||||| ||||| ||| || ||||||||||| ||||| ||||| || Sbjct 10534 TTCAGGCGGCCCTCGATGTAGACCGAGCGGCCCTTCTTCAGGTATTCGCCGGCGATTTCG 10475 Query 26089 GCTACCTTGCCAAACAGCACGACGCGATGCCATTCTGTCACTTCTTTCTTTTCGCCGGTC 26148 || | | ||| || ||||| |||||||| || |||| |||||| | Sbjct 10474 GCCAGGCGGTTGTACATGACCACGCGGTGCCATTCGGTTTCTTCGCGGCGTTCGCCCGAT 10415 Query 26149 TGCTTATCGTTCCAGCTTTCTGAGGTC---GCTACGGTAATGTTGGCGACTGCGCCGCCA 26205 ||| || |||||| | |||||| || | || |||||| || |||| | || Sbjct 10414 GCCTTGTCCTTCCAGGT---GGAGGTCGTGGCGATGGACATGTTGCAGATTGCGGCCCCG 10358 Query 26206 TTAGGCATGTAACGGATCTCTGGATCGTTCCCCAGGTTACCGACAAGGATTACTTTATTT 26265 | || |||| |||| || || ||| |||||||| || || || || ||||| || Sbjct 10357 TCGGGGCTGTAGCGGACTTCCGGGTCGCGACCCAGGTTGCCCACGAGAATGACTTTGTTA 10298 Query 26266 AC 26267 || Sbjct 10297 AC 10296 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 159802419225834