Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_018452.1 Length=61847 Score E Sequences producing significant alignments: (Bits) Value seq4354 378 3e-100 seq1581 214 7e-51 seq6107 190 8e-44 >seq4354 Length=3390 Score = 378 bits (418), Expect = 3e-100 Identities = 1406/2146 (66%), Gaps = 131/2146 (6%) Strand=Plus/Plus Query 52971 ACCGAGAAGGCCAACGACGTCGC-GCAGAAGATGCGCGCGGCTTTCGCGCGCTGGATTTG 53029 |||||| ||| || |||| || ||||||||| | | ||| ||||||||| || Sbjct 541 ACCGAGGCGGCGAA-GACGAAGCTGCAGAAGATCAAGGACGAATTCCAGCGCTGGATCTG 599 Query 53030 GACGGACACGAAGCGCGCCGACCGGCTCGTCAACTACTACAACGAGAACTTCAACAACAT 53089 | | ||| | | ||| ||||||| || | | ||||||||| |||||||||||| Sbjct 600 GTCCGACCCCGATCGCACCGACCGCCTGGCGCGCGTCTACAACGACCGCTTCAACAACAT 659 Query 53090 CGCGCCGCGCCAGTTCGACGGCTCGCACCTGACGCTGCCGGGCGTATCGCTGCGC-TTCG 53148 ||| || ||| ||||| || ||||| |||| ||| || |||| || |||| || | Sbjct 660 CGCCCCACGCGCCTTCGATGGATCGCATCTGAAGCTACCCGGCGCCTCTG-GCGCCTTTG 718 Query 53149 ACCTGCGCGAGAACCAGAAGCGCGCCATCTGGCGCGGCATTCAGGAAGGCGATATGTACC 53208 || | | | ||||| || | |||||||||| ||| || || | || | Sbjct 719 TTCTTTATGGGCATCAGAAACGTGGCATCTGGCGCATCATCTCGGCGGGTTCGACCTATC 778 Query 53209 TCGCGCACGCTGTCGGCGCGGGCAAGACGTTCACGATGATCGCGACGGGCATGGAGGAGC 53268 ||||||||||||||||||| |||||||| | |||||| || ||| |||||| ||| Sbjct 779 TCGCGCACGCTGTCGGCGCCGGCAAGACCATGACGATGGCGGCCGCGGTGATGGAGCAGC 838 Query 53269 GTCGGCTCGGCCTGTCCAACAAGCCGATGTACGCGGTGCCGAACCACATGCTCGCGCAAT 53328 | |||||||||||| | |||| ||||| || || || |||| || ||||| Sbjct 839 GCCGGCTCGGCCTGATCGCCAAGGCGATGATCGTCGTTCCCGGCCACTGCCTGGCGCAGG 898 Query 53329 TCGCGCGCGAGTTCCTTGAGCTGTACCCGGCCGCGAACATCATGGTCGCGGACGAGCAGA 53388 |||||||| || || | ||| || ||| |||| ||| |||||||||||||| | Sbjct 899 CGGCGCGCGAATTTCTCGCGCTCTATCCGAACGCGCGGATCCTGGTCGCGGACGAGACCA 958 Query 53389 ATTTCCACACCCACAACCGCCGCCGGTTC--GTCGCGCAGGCCGCGCTCAACAACCCGGA 53446 ||||| || |||| || | || ||| ||||||| || ||| | | ||| Sbjct 959 ATTTCAGCAAGGACAAGCGGCATCGCTTCCTGTCGCGC--GCGGCGACCGCGACTTGGGA 1016 Query 53447 CGCGATCATCATCACGCACTCGGCGTTCGGCCGCATCGGCATGTCCGACGAGTACGCCTC 53506 |||||||||||||| || || || || |||| | ||| || || | |||| Sbjct 1017 TGCGATCATCATCACCCATTCAGCTTT---CCGCTT---CATCTC-----GGTGC-CCTC 1064 Query 53507 GGCGTTCATCCGCGACCAGATC---GACGAG-TGGAAAGCCGCGCTCGACGAGACG---- 53558 ||||||| | | |||| |||||| |||| |||| |||||||| Sbjct 1065 GGCGTTCGAGCAACAGATGATCCAGGACGAGCTGGA-------GCTCTACGAGACGCTGC 1117 Query 53559 -GAC--AAG--------GGCGACCGCATCACGCGCAAGCAGATCGAGCGCCGCATCGNNN 53607 ||| ||| | ||| ||| || ||||||||| | |||| | | || | Sbjct 1118 TGACCAAAGTCGAAAGCGACGATCGCGTCTCGCGCAAGCGGCTCGAAAGGCTCAAGGAGG 1177 Query 53608 NNNNNNNNNNNNNGCTGGAGGCGAAACAGGGCGGCGAGAAGAAGGACAAGGTGCTGTCGT 53667 ||| || ||| | || | | ||||| | |||| | Sbjct 1178 GCCTGAAAGAGCGGCTCGAAGCG----CTGTCGACTCG--CAAGGATGACCTGCTCACCA 1231 Query 53668 TCGAGGAGCTGGGCGTCGACCGCCTGTTCGTCGACGAGTTCCACGAGTTCCGAAAACTCG 53727 || ||| ||||| |||||| | ||||||||||| || |||||||| |||||| Sbjct 1232 TCTCCGAGATGGGCATCGACCAGATCATCGTCGACGAGGCGCAGGAGTTCCGCAAACTCT 1291 Query 53728 ACTTCGCGACGCAGCAGAGCAAC-ATCAAGGGCATCGACCCGGCGGGCTCGCAGCGCGCG 53786 ||| ||||| || | | || | |||||| |||| ||| ||||||||||||||| Sbjct 1292 CCTTTGCGAC-CAATATGTCGACGTTGAAGGGCGTCGATCCGAACGGCTCGCAGCGCGCG 1350 Query 53787 ATGGACCTGTTCATGAAGGTCCAATACCTGCGCAGCAAGAAGCCGGGCCGCGCGCTCGTG 53846 ||| |||||| | ||| | ||| | || ||||| |||||||| ||||||||| Sbjct 1351 TGGGATCTGTTCGTCAAGTCGCGCTACGTCGACATGAAGAACCCGGGCCGTGCGCTCGTG 1410 Query 53847 GCCGCGTCCGGCACGCCGGTCACGAACACGATGGGCGAGCTCTACACCGCACAACGCT-T 53905 ||| |||||||| ||| |||| ||||| | |||||| | | | | | ||||||| | Sbjct 1411 CTCGCCTCCGGCACCCCGATCACCAACACCCTCGGCGAGATGTTCTCGGTCCAACGCTAT 1470 Query 53906 CTTCCAGCCCGAGCAGCTTGC-CGAGGATGGTCTGGATACGTTCGACGCGTGGGC--CAA 53962 || | ||| |||| |||| ||| ||| | |||||||| ||||| | | Sbjct 1471 CTCGGATATGTGGCA--TTGCTCGAGCGTGGCCTGCACGAATTCGACGCCTGGGCGTCGA 1528 Query 53963 CCAATACGGTGACATCGTTG--CGGGCTTCGAGCAGAACGCCGCCGGCGGCTACGAGGTC 54020 || | ||||||| || | | || || |||| | | | | | || ||| || | Sbjct 1529 CC--TTCGGTGACGTC-TCGACCGAGC-TCGAACTGCAGCCATCGGGTAAATACAAGCCC 1584 Query 54021 GTGAGCCGGTTCGCGAAGTTCCAGAACGTGCCCGAGCTGAT-GCGCCGCGTGCGCTCGTT 54079 || ||| ||||||| ||| ||||| ||||||||||| ||| | | ||||| | Sbjct 1585 GTCTCCCGCTTCGCGACCTTCGTCAACGTTCCCGAGCTGATCGCGATG-TTCCGCTCCAT 1643 Query 54080 CATGGACATCCTGACGAGCCAGCAGCTCTCGCAGTACGTGGATCGTCCGGCGATCGAGGG 54139 | ||| || ||| | | || | | ||||||||| | ||||||||| | Sbjct 1644 CGCCGACGTCGTGATGCCCGAGGATTTGCGCCAGTACGTGAAGGTGCCGGCGATCTCGAC 1703 Query 54140 CGGCGGCCGTCAGATCATGGTCACGCCGGAGCCGTTC---GGATACAAGGCGTACCAGAA 54196 |||| | || |||||| |||| | |||||| | | || |||| ||||||| Sbjct 1704 CGGCAGACGGCAGATC---CTCACAGCAAAGCCGTCCGCTGCATTCAAGCGTTACCAGAC 1760 Query 54197 GGCGCTCGAGCAGCGCATCACCGCGATCCGCAACCGCAAGGGGCCGCCGCAGAAGGGGCA 54256 | ||||| ||||||||| |||||| | ||| | | |||| || || | Sbjct 1761 GCTGCTCGGCGAGCGCATCAAGGCGATCGAGGAGCGCGACCGTGCGCCCGAGCCCGGCGA 1820 Query 54257 GGACATCATCCTGAACGTGATCGCGGACGGCCGTTTCTCCGCGATCGACATGCGCTTCGT 54316 |||||| || || || ||| | || ||||| | | ||||||||| ||||| | || Sbjct 1821 CGACATCCTCTTGTCGGTCATCACCGATGGCCGCCACGCGGCGATCGACCTGCGCCTGGT 1880 Query 54317 CGA-CCCGACCGCGCCGAGCGA-CCCGAGCAGCAAGCTGAACCAGATGATCG---ACGCC 54371 ||| |||||| | | | ||| |||| || ||||||||||||| | ||| ||||| Sbjct 1881 CGATCCCGACAATGAC-AACGAGGCCGA-CAACAAGCTGAACCAGCTCGTCGGCAACGCC 1938 Query 54372 GT---GATC---GCCGACTACCATGCGGCGTCCGACTTCGAGTATTCG-ACGAACGGCAA 54424 | ||| | ||| ||| ||| | | | || | |||| || ||||||| Sbjct 1939 TTCCGCATCTGGGGCGA-TAC--TGCCGAGCGCACCT----ATGTTCGCACCGACGGCAA 1991 Query 54425 ---GGTCGACCCGATCAAGGGCGCGTCGCACATCATCTTTACCGACATCGGGCTCGGCGA 54481 | |||| | | | |||||| |||| || ||||| | ||| || ||| | | Sbjct 1992 GCCGTTCGAACTGCCC---GGCGCGGCGCAGATGATCTTCTCGGACCTC-GGCACCATCA 2047 Query 54482 GCAGTCGGCGAAGAACCGCGG--TTTCGACATGAAGGCGTGGA-TCGAGAAGCGTCTGGT 54538 || ||| | |||| ||||| | ||| | | | || |||| ||| || | | || || Sbjct 2048 GC-GTC-GAGAAGTCGCGCGGCTTCTCGGCCT-ATCGC-TGGATTCGCGACGAG-CTCGT 2102 Query 54539 CGACGGCGGCATCCCGCGCGAGC-AGATCGCGTTCATGCGCGA---CAACAAGGAGCATG 54594 | | ||| | ||| || | | ||||| ||||||| || ||| ||| | | | Sbjct 2103 CCGCATGGGCGTGCCG-GCATCCGAAATCGCCTTCATGCAGGATTTCAAGAAGTCGGAGG 2161 Query 54595 CCAAGAAAGAGCGCCTGTTCGCGGACATGCGCGAGGGCAAAAAGCGCGTGCTGATCGGCG 54654 | ||| |||||||||||| ||| |||||| ||||| ||| | |||||||| Sbjct 2162 C---GAAGCAGCGCCTGTTCGGCGACGTGCGCGCCGGCAAGGTCCGCTTCCTGATCGGGA 2218 Query 54655 GCAAGGAC---ATGGAAACCGGCGTCAACGTGCAGAAGCGCCTCTACACCGAGGAGCATC 54711 || |||| |||| ||||||||||||| |||| ||||||| | || | | || | Sbjct 2219 GCTCGGACACGATGGGGACCGGCGTCAACGCGCAGCTGCGCCTCAAGGCCTTGCATCACC 2278 Query 54712 TGGACGCGCCGTGGTTCCCGGCATCCGTCGAGCAGCGCGAGGGCCGCATCATCCGTCAGG 54771 | |||| ||||||| | ||| | ||||||||||||||||||||||| | || |||| Sbjct 2279 TCGACGTGCCGTGGCTGCCGTCGCAGATCGAGCAGCGCGAGGGCCGCATCGTGCGCCAGG 2338 Query 54772 GCAACCAGAACAAGCAGGTGCGCATCCGCGCCTGGGCGACGAAGGGC-AGCTACGACTCC 54830 |||||||| || | |||| ||| ||||| ||||| ||||| ||| ||| | Sbjct 2339 GCAACCAGCACGACGAGGTCGATATCTTCGCCTATGCGACCGAGGGCTCGCT-CGATGCG 2397 Query 54831 ACCATGTGGGGGATGAACGCCCGCAAGGCGCGGTTCATCGAACAGGCGCTCAACGGCGAC 54890 |||||| || |||| |||||||| || ||||||| ||| || ||||||| Sbjct 2398 CAGATGTGGCAGAACAACGAGCGCAAGGCCCGCTTCATCGCCGCGGCTCTTTCCGGCGAC 2457 Query 54891 GACAGCG-TGCGCTCGCTCGAGGACGTGTCCGAG-GCATCGGCA-----TTCGACATGGC 54943 || || | ||| |||||||||| || |||| || | || |||| ||||| Sbjct 2458 -ACTTCGATCCGCAGGCTCGAGGACATGGGCGAGAGCCAGGCCAACCAGTTCGCGATGGC 2516 Query 54944 CGCCGCGCTGGCGTCGGGCGACGAGCGCTACATGAAGCTGGCGGGCCTGAAGGCCGACGT 55003 | ||| | |||||||| ||| ||| ||| || ||| || || |||||||| | Sbjct 2517 CAAGGCGATCGCGTCGGGTGACCCGCGGCTGATGCAGAAGGCCGGGCTCGAGGCCGACAT 2576 Query 55004 CGAGCGGCTGGAGCGCCTGAGCTACGCGCACCACGACGACCAGAAC 55049 || |||||| || |||||| || ||| || ||| || ||| || Sbjct 2577 CGCGCGGCTCGAACGCCTGCGCGCCGCCCATATCGATGATCAGCAC 2622 Score = 89.7 bits (98), Expect = 2e-13 Identities = 181/258 (70%), Gaps = 13/258 (5%) Strand=Plus/Plus Query 52515 GAGGTCATCGACGCGCTCGGCACCGCGATCTACGAGGACCCGGCGAAGGGCT---GGCAG 52571 || ||| ||| || |||||||| |||||||| | || ||||| | || | ||||| Sbjct 58 GATGTCGTCGCCGAGCTCGGCAGCGCGATCTTCCGCGATCCGGCTGACGGTTCATGGCAG 117 Query 52572 ACGTCCGACGCGTACCTGTCGGGTAACGTCGTGCG-CAAACTCGCCGAGGCGCAGGCCGC 52630 ||| | ||||| || ||||| || ||| | ||| ||| ||| ||| | || || Sbjct 118 ACGGCGGACGCCTATCTGTCAGGCCCCGT-GCGCGACAAGCTCAAAACGGCAGAAGCGGC 176 Query 52631 GGCGCGCAG-CGACCGCA-AGTACCAGCGCAACGTCGAGGCACTGCTGGCCGTGCAGCCG 52688 ||| |||| |||| ||| ||||| ||||||| ||| || |||| | ||| ||||| Sbjct 177 GGC-CGCACTCGAC-GCAGAGTACGAGCGCAATGTCACTGCGCTGCAAGGCGTCCAGCCC 234 Query 52689 AAGCCG--CTCGGCCCGAGCGACATCACGGTGAAGCTGGGCCAGAACTGGATTCCGGCGG 52746 |||| ||| ||||| ||||||||||| | ||| ||| | ||||| ||||| | Sbjct 235 --GCCGATCTCAGCCCGTCCGACATCACGGCGCGGCTCGGCGCGCCATGGATCCCGGCCG 292 Query 52747 CCGACGTCGCCGTGTTCG 52764 |||| ||| || |||| Sbjct 293 CCGATATCGTCGCTTTCG 310 >seq1581 Length=10720 Score = 214 bits (236), Expect = 7e-51 Identities = 256/342 (75%), Gaps = 7/342 (2%) Strand=Plus/Plus Query 9960 CGACATGGCATCCGTCAACAAAGTCATCCTCGTCGGCAATCTCGGCGCCGACCCGGAAAC 10019 || ||||||||| || ||||||||||| ||||| ||||| || || |||||||||| Sbjct 10283 CGGCATGGCATCGGTTAACAAAGTCATTCTCGTGGGCAACCTGGGTCGCGACCCGGAAGT 10342 Query 10020 CCGCTACCTCCCGAGCGGCGACGCAATCTCCAACATCCGCCTCGCTACGACCGATCGCTA 10079 ||||||| ||| ||| | |||||||| |||||| | |||| |||||| || Sbjct 10343 CCGCTACAGCCCCGACGGGGCCGCAATCTGCAACATGTCCATCGCCACGACCTCCACCTG 10402 Query 10080 CAAGGACAAGGCGAGCGGCGAGATGAAG-GAATCGACCGAATGGCACCGCGTCAGCTTCT 10138 ||||||||||| ||||| | | | ||| ||||||||||||||||| | | | Sbjct 10403 GAAGGACAAGGCATCGGGCGA-ACGCCGCGAAGAAACCGAATGGCACCGCGTGGTCATGT 10461 Query 10139 TCGGCCGCCTCGCCGAGATCGTCGACGAGTACCTGCGCAAGGGCGCGC-CGGTCTACATC 10197 | |||||| ||||| |||| || ||| |||||| |||||| ||| ||||||||||| Sbjct 10462 ACAACCGCCTGGCCGAAATCGCCGGCGAATACCTGAAGAAGGGC-CGCTCGGTCTACATC 10520 Query 10198 GAGGGCCGCATCCGCACGCGGAAGTGGCAGGATA---ACGCCGGCCAGGATCGCTACACG 10254 ||||||||| | || || |||||||| || | || ||||| || ||||||| Sbjct 10521 GAGGGCCGCCTGAAGACCCGCAAGTGGCAAGACAAGGACACCGGCGCTGACCGCTACAGC 10580 Query 10255 ACCGAGATCGTCGCCGAGAAGATGCAGATGCTCGGCGACCGC 10296 ||||| ||||||||||| ||||||||||||| |||| |||| Sbjct 10581 ACCGAAATCGTCGCCGACCAGATGCAGATGCTGGGCGGCCGC 10622 >seq6107 Length=1809 Score = 190 bits (210), Expect = 8e-44 Identities = 295/416 (71%), Gaps = 14/416 (3%) Strand=Plus/Plus Query 53066 CTACAACGAGAACTTCAACAACATCGCGCCGCGCCAGTTCGACGGCTCGCACCTGACGCT 53125 |||||| || | ||||||||||||| ||| ||||| ||||| || ||||||| | ||| Sbjct 1008 CTACAATGACACGTTCAACAACATCGTGCCCCGCCATTTCGATGGAACGCACCTCAAGCT 1067 Query 53126 GCCGGGCGTATCGCTGCGCTTCGAC-CTGCGCGAGAACCAGAAGCGCGCCATCTGGCGCG 53184 || |||| || |||| | | || | |||||||||| |||||||||||| Sbjct 1068 TCCCGGCGCCTCTG-GCGCCTTTTCTCTTTATGGACACCAGAAGCGGGCCATCTGGCGCA 1126 Query 53185 GCAT----TCAGGAAGGCGATATGTACCTCGCGCACGCTGTCGGCGCGGGCAAGACGTTC 53240 ||| || || || ||||| ||||||||| |||||||| ||||||||| || Sbjct 1127 TCATCGCTTCCGGCAGCACCTATGT----CGCGCACGCCGTCGGCGCCGGCAAGACGCTC 1182 Query 53241 ACGATGATCGCGACGGGCATGGAGGAGCGTCGGCTCGGCCTGTCCAACAAGCCGATGTAC 53300 |||| |||| || ||||||| | || |||||||||||| ||||||| ||||| | Sbjct 1183 TCGATCGCCGCGGCGATCATGGAGCAACGCCGGCTCGGCCTGATCAACAAGGCGATGCTC 1242 Query 53301 GCGGTGCCGAACCACATGCTCGCGCAATTCGCGCGCGAGTTCCTTGAGCTGTACCCGGCC 53360 | ||||| ||| |||||||| ||||||||||||||| | ||| || || Sbjct 1243 GTCGTGCCAGGCCATTGCCTCGCGCAGGCCGCGCGCGAGTTCCTGGCGCTCTATCCCAAT 1302 Query 53361 GCGAACATCATGGTCGCGGACGAGCAGAATTTCCACACCCACAACCGCCGCCGGTTC--G 53418 ||| |||| | ||||| |||||| ||||||| | | || || | ||| ||| | Sbjct 1303 GCGCGCATCCTCGTCGCCGACGAGACGAATTTCGTGAAGGAAAAGCGTCACCGCTTCCTG 1362 Query 53419 TCGCGCAGGCCGCGCTCAACAACCCGGACGCGATCATCATCACGCACTCGGCGTTC 53474 |||||| || ||| | ||| ||| |||||||||||||| || || || ||| Sbjct 1363 TCGCGC--GCGGCGACCGCGAACTGGGATGCGATCATCATCACCCATTCCGCCTTC 1416 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 197770012412742